A comprehensive and customizable R package for microbiome analysis.
Helper R scripts for multiple PERMANOVA tests, AICc script for PERMANOVA, etc.
Package for automation of statistics that are widely used in metabolomics.
This is a microbial amplicon sequence (16S and 18S iTag) data and analyses pipeline corresponding to the manuscript, "Community ecology across bacteria, archaea and microbial eukaryotes in the sediment and seawater of coastal Puerto Nuevo, Baja California" for public benefit and usage.
This function carries out UNIVARIATE PERMANOVA on community matrix, one taxa/species at a time
Phylogeny-aware power analysis and sample-size estimation for microbiome community studies (metagenomic and metaproteomic)
Statistical analysis of THz radiation impact on cell metabolomics
Statistical methods implemented from first principles in R and Python, with mathematical derivations, reproducible code, and applications to computational biology, statistical genetics, and machine learning.
Distance-based Multivariate ANOVA
Microbiome Diversity Analysis Pipeline — alpha/beta diversity + top-N composition in one command
Reproducible R portfolio project analyzing multidimensional Breakout profiles in simulated AI-media performance data.
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