A tool for the spatial analysis of diversity

A comprehensive and customizable R package for microbiome analysis.

A pipeline for phylogenetic diversity analysis of GBIF-mediated data

Approximate UniFrac via Weighted MinHash 🦀

🦠Research project in Bioinformatics Institute 2023-2024

parallel, efficient and ensemble analysis of Rao's Q spectral diversity using remote sensing datasets.

The following codes are focused on microbiome analysis, alpha, beta and relative abundance differences.

🌍🌾 Presentation of the Article "Climate Change May Alter the Availability of Wild Food Plants in the Brazilian Semiarid"

R package for building turnover saturation curves via bootstrapping

Ordin: An open-source cross-platform electron desktop application for community ecology analysis.

Microbiome Data Analysis

TEIXEIRA, J. V. A.; SOUZA, E. C. Use of microbial fuel cell systems in wastewater treatment in connection with bioenergy generation. Desafios. Revista Interdisciplinar da Universidade Federal do Tocantins. Palmas, 2025. DOI: // Microbial fuel cells: Unveiling microbial diversity for sustainable wastewater treatment and bioenergy production

🦇🧫📊Study on bat gut shotgun metagenomics

R pipeline for multiscale biodiversity analyses and ecological community reorganization modeling.

Generalized Dissimilarity Modeling workshop slides, scripts, and readings from a workshop I led in Summer 2023 at UC Merced

Take advantage of the adehabitat packages in R to determine ecological community richness: including alpha, beta, and gamma diversity!

The Local Ecological Footprinting Tool (LEFT), is a web-based decision support tool which can help businesses minimise the environmental impacts of their activities when they make decisions about how land is used.

verificacao da homogeneidade biotica em bioma de restinga de mata atlantica atraves de testes de alfa e beta diversidade para riqueza e abundancia de especies

Data and code of Bauer et al. (2024) J Veg Sci