🦇🧫📊Study on bat gut shotgun metagenomics

CompGen Labs

Docker container for W2RAP based on CentOS

Reusable comparative bacterial genomics pipeline for assembled bacterial genome FASTA files using QUAST, Bakta, FastANI, Panaroo, and FastTree.

Run multiple metagenome filtering programs using Docker containers

The repository contains a comprehensive pipeline for genome assembly and quality assessment, designed for genomic data analysis. It integrates various bioinformatics tools for accurate genome assembly.

[a.a. 24/25] C. Coscarelli, M. Santoriello

Reusable bacterial genome analysis pipeline for paired-end FASTQ data using FastQC, fastp, SPAdes, QUAST, Prokka, and MultiQC.