Repositories list

• cbioportal-mcp-qa

  Public
  cBioPortal Chat Benchmark

  HTML

  •22 forks•33 stars•44 issues•22 pull requests•Updated Oct 4, 2026Oct 4, 2026

• cbioportal-tile-server

  Public
  Python

  •22 forks•00 stars•00 issues•33 pull requests•Updated Oct 3, 2026Oct 3, 2026

• relicensing

  Public
  00 forks•00 stars•1111 issues•00 pull requests•Updated Oct 3, 2026Oct 3, 2026

• cbioportal-frontend

  Public
  React Frontend of cBioPortal :tada:

  reactmobxcancer-genomics

  reactmobxcancer-genomics

  TypeScript

  •

  GNU Affero General Public License v3.0

  •436436 forks•152152 stars•00 issues•7070 pull requests•Updated Oct 2, 2026Oct 2, 2026

• cbioportal-test

  Public
  Tests for cBioPortal.

  HTML

  •

  MIT License

  •33 forks•00 stars•00 issues•22 pull requests•Updated Oct 2, 2026Oct 2, 2026

• cbioportal

  Public
  cBioPortal for Cancer Genomics

  visualizationsciencecancer-genomics+ 1

  visualizationsciencecancer-genomicsprecision-medicine

  Java

  •

  GNU Affero General Public License v3.0

  •876876 forks•1k1k stars•304304 issues•3535 pull requests•Updated Oct 2, 2026Oct 2, 2026

• cbioportal-core

  Public
  Externalized cBioPortal Core

  Java

  •3333 forks•55 stars•2727 issues•3535 pull requests•Updated Oct 2, 2026Oct 2, 2026

• cbioportal-cell-explorer

  Public
  TypeScript

  •

  MIT License

  •22 forks•11 star•2323 issues•1010 pull requests•Updated Oct 2, 2026Oct 2, 2026

• LibreChat

  Public
  Enhanced ChatGPT Clone: Features Agents, MCP, DeepSeek, Anthropic, AWS, OpenAI, Responses API, Azure, Groq, o1, GPT-5, Mistral, OpenRouter, Vertex AI, Gemini, A…

  TypeScript

  •

  MIT License

  •9.3k9.3k forks•00 stars•00 issues•33 pull requests•Updated Oct 1, 2026Oct 1, 2026

• cbioportal-mcp

  Public
  Python

  •1313 forks•1515 stars•2727 issues•77 pull requests•Updated Sep 30, 2026Sep 30, 2026

• datahub

  Public
  A centralized location for storing curated data from cBioPortal

  HTML

  •140140 forks•218218 stars•142142 issues•2929 pull requests•Updated Sep 30, 2026Sep 30, 2026

• cbioportal-docker-compose

  Public
  Run cBioPortal using Docker Compose

  Shell

  •6161 forks•2323 stars•88 issues•77 pull requests•Updated Sep 29, 2026Sep 29, 2026

• cell-explorer-py

  Public
  Python

  •

  MIT License

  •11 fork•11 star•2020 issues•00 pull requests•Updated Sep 29, 2026Sep 29, 2026

• cbioportal-navigator

  Public
  MCP server for natural language user query -> cBioPortal URL

  TypeScript

  •77 forks•44 stars•1111 issues•33 pull requests•Updated Sep 27, 2026Sep 27, 2026

• data-contribution-dashboard

  Public
  TypeScript

  •

  GNU Affero General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 25, 2026Sep 25, 2026

• datahub-study-curation-tools

  Public
  Contains tools used by cBioPortal data curators when preparing data for upload into the datahub repos.

  HTML

  •

  GNU Affero General Public License v3.0

  •2121 forks•2323 stars•22 issues•1010 pull requests•Updated Sep 20, 2026Sep 20, 2026

• cancerhotspots

  Public
  Cancer Hotspots

  JavaScript

  •

  GNU Affero General Public License v3.0

  •1010 forks•88 stars•55 issues•00 pull requests•Updated Sep 19, 2026Sep 19, 2026

• cbioportal-release-manager

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 17, 2026Sep 17, 2026

• database-exporter

  Public
  Manage public cBioPortal database exports/dumps and pipelines for publishing on external platforms, including HuggingFace.

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 4, 2026Sep 4, 2026

• oncotree

  Public
  Python

  •

  Creative Commons Attribution 4.0 International

  •3232 forks•5353 stars•3131 issues•1616 pull requests•Updated Sep 1, 2026Sep 1, 2026

• cbioportal-helm

  Public
  Helm charts for cBioPortal Kubernetes Deployment

  11 fork•00 stars•22 issues•11 pull request•Updated Aug 18, 2026Aug 18, 2026

• session-service

  Public
  Java

  •2222 forks•88 stars•1212 issues•11 pull request•Updated Jul 23, 2026Jul 23, 2026

• cbioportal-onco-variant-annotation-bench

  Public
  Independent benchmark of variant annotation/effect tools (Genome Nexus, Ensembl VEP, fastVEP, vibe-vep, OpenCRAVAT) against published cancer datasets (MSK-IMPAC…

  Python

  •11 fork•00 stars•00 issues•11 pull request•Updated Jul 8, 2026Jul 8, 2026

• cbioportal-assistant-api

  Public
  Standalone chat API microservice for the cBioPortal AI assistant.

  TypeScript

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 17, 2026Jun 17, 2026

• ai_curation_assistant

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated May 14, 2026May 14, 2026

• GSoC

  Public
  Documentation repository of Google Summer of Code (GSoC) project ideas for cBioPortal and related projects

  6565 forks•201201 stars•3232 issues•11 pull request•Updated Mar 20, 2026Mar 20, 2026

• maf

  Public
  Utility classes for the Mutation Annotation Format (MAF)

  Java

  •00 forks•00 stars•00 issues•11 pull request•Updated Mar 18, 2026Mar 18, 2026

• installation-map

  Public
  cBioPortal Installation Map

  TypeScript

  •44 forks•00 stars•00 issues•00 pull requests•Updated Mar 1, 2026Mar 1, 2026

• clinical-data-dictionary

  Public
  Clinical Attribute Web Service for retrieving clinical attribute names and metadata.

  Java

  •99 forks•66 stars•44 issues•44 pull requests•Updated Feb 25, 2026Feb 25, 2026

• cbioportal-vitessce-proxy

  Public
  TypeScript

  •00 forks•00 stars•22 issues•00 pull requests•Updated Feb 3, 2026Feb 3, 2026