Issues

• Title: Cluster-Based Mutation Analysis for Similarity Maps

  cBioPortal/GSoC#144 · Filter by author Tanyasharma71 opened on Mar 21, 2026
  1

• Enhance Similarity Maps (Embeddings) Visualization in cBioPortal

  cBioPortalDifficulty: MediumGSoC-2026JavaJavascriptSize: Large (350h)Size: Medium (175h)
  cBioPortal/GSoC#141 · Filter by author snippy-ai opened on Feb 20, 2026
  7

• Integrating AlphaGenome into Genome Nexus and cBioPortal for Comprehensive Variant Effect Prediction

  cBioPortalDifficulty: MediumGenome-NexusJavaJavascriptPythonSize: Medium (175h)
  cBioPortal/GSoC#139 · Filter by author leexgh opened on Feb 3, 2026
  3

• AI-Assisted Curation Assistant Tool for cBioPortal

  Difficulty: MediumGSoC-2026LLMPipelinePythonSize: Medium (175h)
  cBioPortal/GSoC#138 · Filter by author rmadupuri opened on Feb 3, 2026
  31

• Reimagining the Study View Charts Menu: A UX-Driven Redesign

  Difficulty: MediumGSoC-2026JavascriptSize: Medium (175h)
  cBioPortal/GSoC#137 · Filter by author alisman opened on Feb 2, 2026
  9

• Automated Clinical Metadata Harmonization Dashboard

  Difficulty: MediumGSoC-2026JavascriptPythonSize: Large (350h)Size: Medium (175h)
  cBioPortal/GSoC#136 · Filter by author shbrief opened on Feb 2, 2026
  8

• Enhance 3D Protein Structure Viewer in cBioPortal using AlphaFold Data

  Difficulty: HardGSoC-2026JavaJavascriptSize: Large (350h)
  cBioPortal/GSoC#135 · Filter by author jjgao opened on Feb 2, 2026
  9

• cBioPortal User Profile Page

  Difficulty: MediumGSoC-2026JavascriptSize: Medium (175h)
  cBioPortal/GSoC#134 · Filter by author inodb opened on Feb 2, 2026
  11

• MCP Apps: Interactive Genomic Visualizations for AI Clients

  Difficulty: HardGSoC-2026JavascriptLLMSize: Large (350h)
  cBioPortal/GSoC#132 · Filter by author inodb opened on Jan 28, 2026
  10

• Frequency & Counts Tables for Generic Assay Data

  Difficulty: MediumGSoC-2026JavaJavascriptSize: Medium (175h)
  cBioPortal/GSoC#131 · Filter by author dippindots opened on Jan 21, 2026
  6

• Create Component for changing color gradient of Oncoprint

  potential-future-gsoc-idea
  cBioPortal/GSoC#130 · Filter by author inodb opened on Aug 29, 2025
  3

• Show Mutation Types on Hover in Mutual Exclusivity Matrix

  cBioPortal/GSoC#129 · Filter by author sania-2912 opened on May 6, 2025
  1

• cBioPortal Study View: Advanced Dashboard Integration

  GSoC-2026JavaJavascriptSize: Medium (175h)
  Feature

  cBioPortal/GSoC#126 · Filter by author dippindots opened on Mar 20, 2025
  20

• Create an automated metadata harmonization/curation tool

  cBioPortalDifficulty: MediumGSoC-2025PythonSize: Large (350h)
  cBioPortal/GSoC#124 · Filter by author shbrief opened on Mar 12, 2025
  8

• LLM Copilot for cBioPortal

  cBioPortalDifficulty: HardGSoC-2025JavaLLMSize: Large (350h)
  cBioPortal/GSoC#121 · Filter by author jjgao opened on Mar 6, 2025
  10

• Add Pagination Sorting to Discrete Copy Number Alterations API Endpoint

  JavaJavascript
  cBioPortal/GSoC#118 · Filter by author jagnathan opened on Feb 11, 2025

• Re-implement Study View's data binning algorithm using SQL (instead of Java)

  cBioPortalDifficulty: MediumenhancementGSoC-2025JavaSize: Medium (175h)SQL
  cBioPortal/GSoC#117 · Filter by author alisman opened on Feb 4, 2025
  10

• Frontend visualization and incorporation of single cell data in cBioPortal

  cBioPortalDifficulty: MediumGSoC-2024JavascriptSize: Large (350h)
  cBioPortal/GSoC#112 · Filter by author sowmiyaa-kumar opened on Mar 15, 2024
  7

• PathwayMapper improvements

  cBioPortalDifficulty: HardGSoC-2024JavaJavascriptSize: Large (350h)
  cBioPortal/GSoC#109 · Filter by author ugurdogrusoz opened on Feb 6, 2024
  4

• Upgrade cBioPortal to newer version of Node.js and Webdriver.io

  Difficulty: MediumGSoC-2024Size: Medium (175h)
  cBioPortal/GSoC#108 · Filter by author alisman opened on Feb 5, 2024
  5

• Clinical Timeline Standalone Package and Documentation

  cBioPortalDifficulty: MediumGSoC-2025Size: Large (350h)Size: Medium (175h)
  cBioPortal/GSoC#106 · Filter by author cannin opened on Jan 9, 2024
  6

  

• Add gene-level charts to study view for categorical molecular profiles

  Difficulty: HardGSoC-2024JavaJavascriptSize: Large (350h)Size: Medium (175h)
  cBioPortal/GSoC#100 · Filter by author tmazor opened on Mar 3, 2023
  9

• Pathway improvements in cBioPortal

  Difficulty: HardGSoC-2023JavaJavascriptSize: Large (350h)
  cBioPortal/GSoC#98 · Filter by author ugurdogrusoz opened on Feb 8, 2023
  7

• Improve patient timeline user interface

  cBioPortal/GSoC#94 · Filter by author jagnathan opened on Feb 7, 2023
  6

• Improve Genome Nexus' Command Line Interface Experience

  Difficulty: MediumGenome-NexusGSoC-2022JavaJavascriptPythonSize: Large (350h)
  cBioPortal/GSoC#93 · Filter by author inodb opened on Apr 1, 2022
  12