Issues

• brand assets no longer answer 304 to conditional requests

  cBioPortal/cell-explorer-py#198 · Filter by author hweej opened on Sep 24, 2026

• validate_static_dir can raise PermissionError out of create_app

  cBioPortal/cell-explorer-py#197 · Filter by author hweej opened on Sep 24, 2026

• docker: pin and record the frontend ref used in an image build

  dockerenhancement
  cBioPortal/cell-explorer-py#190 · Filter by author hweej opened on Aug 27, 2026
  

• facets: per-dataset facet alias overrides

  enhancement
  cBioPortal/cell-explorer-py#185 · Filter by author hweej opened on Aug 27, 2026
  

• auth: set up Microsoft Entra tenant + verify OIDC end-to-end

  enhancement
  cBioPortal/cell-explorer-py#176 · Filter by author hweej opened on Aug 6, 2026
  

• auth: standardize on OIDC_* config and deprecate KEYCLOAK_* aliases

  refactoring
  cBioPortal/cell-explorer-py#174 · Filter by author hweej opened on Aug 4, 2026
  

• db: Alembic autogenerate drift on chat_threads/chat_messages indexes + FK + prompt_addendum type

  refactoring
  cBioPortal/cell-explorer-py#171 · Filter by author hweej opened on Jul 16, 2026
  

• auth: implement CloudFront signed-cookie minting for ambient Zarr access

  enhancement
  cBioPortal/cell-explorer-py#166 · Filter by author hweej opened on Jun 24, 2026
  

• Per-dataset gene_label_column override

  agentenhancement
  cBioPortal/cell-explorer-py#163 · Filter by author hweej opened on May 22, 2026

• cell2zarr: skip Phase 1 when input X is CSC

  cell2zarrenhancement
  cBioPortal/cell-explorer-py#158 · Filter by author hweej opened on May 22, 2026

• Langfuse: opt-in toggle to ship private-dataset content (for self-hosted Langfuse)

  agentenhancement
  cBioPortal/cell-explorer-py#141 · Filter by author hweej opened on May 20, 2026

• clear_filter only clears the custom-ID group — leaves expression and spatial filters intact

  agentbug
  cBioPortal/cell-explorer-py#139 · Filter by author hweej opened on May 19, 2026

• Agent skips tool calls in later turns of long conversations (0 tools called when one was expected)

  agentbug
  cBioPortal/cell-explorer-py#137 · Filter by author hweej opened on May 19, 2026

• tests: cross-package pytest invocation breaks under session-scoped async loops

  enhancementtests
  cBioPortal/cell-explorer-py#119 · Filter by author hweej opened on May 18, 2026
  

• Update minimum Python version to 3.13+

  cBioPortal/cell-explorer-py#38 · Filter by author hweej opened on Apr 14, 2026

• Clean up CLI args vs encoding config overlap

  cell2zarrrefactoring
  cBioPortal/cell-explorer-py#28 · Filter by author hweej opened on Apr 1, 2026

• Add row-chunked X layer for cell-oriented queries

  cell2zarrenhancement
  cBioPortal/cell-explorer-py#15 · Filter by author hweej opened on Mar 27, 2026

• Support --key raw in cell2zarr add subcommand

  cell2zarrenhancement
  cBioPortal/cell-explorer-py#9 · Filter by author hweej opened on Mar 26, 2026

• Support partial Zarr stores — progressive conversion and frontend fallbacks

  cell2zarr
  cBioPortal/cell-explorer-py#5 · Filter by author hweej opened on Mar 26, 2026
  1

• Add semantic versioning and changesets

  cBioPortal/cell-explorer-py#3 · Filter by author hweej opened on Mar 26, 2026