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BulkProcessingdatascript.R Query

Status: Open.

#33 In Swarbricklab-code/BrCa_cell_atlas;

· HiraDatascience opened on Feb 5, 2026

Bulk data format

Status: Open.

#32 In Swarbricklab-code/BrCa_cell_atlas;

· emiliamoralest opened on Jun 25, 2025

Garnett subtypes

Status: Open.

#28 In Swarbricklab-code/BrCa_cell_atlas;

· miguecass opened on Aug 16, 2023

Reproducing SC subtype calls

Status: Open.

#27 In Swarbricklab-code/BrCa_cell_atlas;

· miguecass opened on Aug 9, 2023

Request for providing RData files for major,minor,subset celltypes

Status: Open.

#26 In Swarbricklab-code/BrCa_cell_atlas;

· tahseen-igib opened on Aug 8, 2023

Request for providing script for running stereoscope for spatial data

Status: Open.

#25 In Swarbricklab-code/BrCa_cell_atlas;

· tahseen-igib opened on Aug 4, 2023

Deconvolution file corresponding to 1160920F Patient counts from the zenodo repository.

Status: Open.

#20 In Swarbricklab-code/BrCa_cell_atlas;

· ZheFrench opened on Oct 17, 2022

CITE-seq data filtering

Status: Open.

#17 In Swarbricklab-code/BrCa_cell_atlas;

· BMBlobner opened on Jun 6, 2022

scSubtype related code，Is it possible to call directly？

Status: Open.

#16 In Swarbricklab-code/BrCa_cell_atlas;

· zhangjl-work opened on Jun 6, 2022

Batch Corrected Count Matrix

Status: Open.

#15 In Swarbricklab-code/BrCa_cell_atlas;

· Ethan-Earlie opened on May 19, 2022

Code about the gene module

Status: Open.

#12 In Swarbricklab-code/BrCa_cell_atlas;

· JulieBaker1 opened on Mar 20, 2022

Can't find codes for subclustering of epithelial cells

Status: Open.

#4 In Swarbricklab-code/BrCa_cell_atlas;

· FlyPythons opened on Oct 29, 2021