msfragger

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Python Package for the downstream analysis of mass-spectrometry-based proteomics data

R package and Shiny app for the dowstream analysis of quantitative proteomic data

Mass spectrometry-based chemoproteomics pipeline for analyzing electrophile selectivity and identifying chemoproteomics detected amino acids (CpDAAs)

Chemical labeling-based filtering for selecting confidently N-terminal biotinylated precursors in Spectronaut and MSFragger spectral libraries.

proteomics dia dda mass-spectrometry spectral-library spectronaut msfragger biotinylation n-terminomics

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