TransformerCPI: Improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label reversal experiments(BIOINFORMATICS 2020) https://doi.org/10.1093/bioinformatics/btaa524

Support Vector Machine-based method for subcellular localization of human proteins using amino acid compositions, their order, and similarity search

TargetX is an automated bioinformatics pipeline designed to rapidly screen potential drug targets from an extensive bacterial dataset. TargetX uses a systemic "negative-to-positive" filtering strategy to filter thousands of protein sequences to a handful of candidates that are essential far the survival of pathogen.