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Adjudicate two CDR2L ligand leads against named reference sequences - #64

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ahrazzle merged 2 commits into
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research/cdr2l-sequence-audit-20261106
Nov 6, 2026
Merged

ahrazzle merged 2 commits into
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research/cdr2l-sequence-audit-20261106

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@ahrazzle ahrazzle commented Nov 6, 2026 •

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Two curated IEDB HLA-II peptide leads match canonical CDR2L Q86X02 at their recorded coordinates and the explicitly checked unreviewed CDR2L entry A0ACI8RKQ2. Neither matches the checked CDR2 reference Q01850 under exact or I/L-equivalent matching. Adds a bounded live audit, aggregate certificate, research report and claim/source records.

The executed comparison covers three named reference sequences. Broader search was unavailable for this result; there is no proteome-wide uniqueness claim or validation of spectra, allotype assignment, receptor recognition or injury. No patient material or study spectra were used.

Dependency #63 has landed; this PR targets main. The scientific seven-file diff is byte-for-byte identical to the independently reviewed result. Validation at head 4c0cf0f: all 372 local tests, registry validator and offline audit checker pass, independently repeated by another Astra agent. Independent live replay matched every retained semantic field including source hashes, versions and coordinates. All hosted Verify and cross-architecture checks passed. Approval was renewed after retargeting to main.

The offline checker establishes internal consistency, not source truth. Internal review is not external scientific review.

@ahrazzle
ahrazzle changed the base branch from main to fix/linux-preflight-fixture-20261106 November 6, 2026 19:02
@ahrazzle
ahrazzle marked this pull request as ready for review November 6, 2026 19:18
Base automatically changed from fix/linux-preflight-fixture-20261106 to main November 6, 2026 19:20
@ahrazzle
ahrazzle dismissed a stale review November 6, 2026 19:20

The base branch was changed.

@ahrazzle
ahrazzle merged commit 4f365cc into main Nov 6, 2026
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@ahrazzle
ahrazzle deleted the research/cdr2l-sequence-audit-20261106 branch November 6, 2026 19:22
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