Issues

• Bug fix release

  AllenInstitute/abc_atlas_access#106 · Filter by author morriscb opened on Apr 6, 2026

• Release HMBA-BG Macaque Patch-seq data.

  AllenInstitute/abc_atlas_access#103 · Filter by author morriscb opened on Feb 18, 2026

• ModuleNotFoundError: No module named 'abc_atlas_access.abc_atlas_cache.anndata_utils'

  AllenInstitute/abc_atlas_access#90 · Filter by author NedaVU opened on Oct 16, 2025
  1

• Swapped sections in Zhuang-ABCA-1

  AllenInstitute/abc_atlas_access#89 · Filter by author chrism-reid opened on Aug 14, 2025

• Why h5ad files directly downloaded using wget, can't be identified by abc_cache.get_data_path() function?

  AllenInstitute/abc_atlas_access#87 · Filter by author zyll123 opened on Jun 28, 2025
  1

• Re-organize MapMyCells data

  AllenInstitute/abc_atlas_access#86 · Filter by author danielsf opened on Jun 9, 2025
  2

• How should I download the entire dataset where these single-cell data have already been mapped to brain slices?

  AllenInstitute/abc_atlas_access#77 · Filter by author seasonzhao opened on Mar 30, 2025
  4

• How can directly download the entire expression matrix (4.0 million single cells × 30,000 genes)

  AllenInstitute/abc_atlas_access#76 · Filter by author Counts-Xin opened on Mar 20, 2025
  1

• Update aging data UMAP

  AllenInstitute/abc_atlas_access#70 · Filter by author morriscb opened on Jan 16, 2025

• share metadata in feather or parquet format

  AllenInstitute/abc_atlas_access#69 · Filter by author tmchartrand opened on Jan 14, 2025
  4

• Questions about registering spatial transcriptome data with CCF

  AllenInstitute/abc_atlas_access#42 · Filter by author Super-LzzZ opened on Feb 25, 2024
  1

• parcellation boundary overlay

  AllenInstitute/abc_atlas_access#41 · Filter by author KatMedMed opened on Feb 22, 2024
  1

• Issue on page /intro.html

  AllenInstitute/abc_atlas_access#40 · Filter by author stefanonard85 opened on Feb 19, 2024
  2

• single transcript coordinates file/ cannot find it on AWS

  AllenInstitute/abc_atlas_access#39 · Filter by author stefanonard85 opened on Feb 18, 2024

• Issue on page /notebooks/getting_started.html

  AllenInstitute/abc_atlas_access#33 · Filter by author jackwalleninstituteorg opened on Nov 20, 2023

• Include release notes / change log

  AllenInstitute/abc_atlas_access#30 · Filter by author tmchartrand opened on Sep 26, 2023
  1

• Mismatch between cell metadata and expression matrix

  AllenInstitute/abc_atlas_access#28 · Filter by author rwollman opened on Sep 17, 2023
  3

• Auto-generate "resource page" html files

  AllenInstitute/abc_atlas_access#21 · Filter by author puja-trivedi opened on Sep 8, 2023

• Abstract away data access

  AllenInstitute/abc_atlas_access#20 · Filter by author puja-trivedi opened on Sep 8, 2023

• Missing division information from terms / pivot table

  AllenInstitute/abc_atlas_access#19 · Filter by author rwollman opened on Sep 8, 2023
  1

• no data to run 10x_snRNASeq_tutorial_part_2a

  AllenInstitute/abc_atlas_access#17 · Filter by author djarecka opened on Sep 1, 2023