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5 changes: 5 additions & 0 deletions .vscodeignore
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Expand Up @@ -68,3 +68,8 @@ Thumbs.db
*.swp
*.swo
*~

# Coverage reports + maintainer-only files (never shipped in the extension)
coverage/**
.c8rc.json
RELEASING.md
20 changes: 20 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -5,6 +5,26 @@ All notable changes to BioFmt will be documented in this file.
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.1.0/),
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## [1.3.0] - 2026-07-09

### Added

- LSP IntelliSense: autocompletion and go-to-definition for VCF (INFO/FORMAT/FILTER keys), GFF3, and SAM.
- GFF3 language features: find-all-references, rename, and a hierarchical feature tree view in the preview.
- Inline error decorations that surface LSP diagnostics directly on the affected lines in the editor.
- In-preview find with match highlighting and next/previous navigation, plus keyboard navigation in previews.
- Amino-acid property colouring in the FASTA preview.

### Changed

- The VCF preview now parses only the sample columns currently in view, keeping population-scale cohorts responsive.

### Fixed

- CRLF handling across the bulk validators — Windows (CRLF) files no longer produce spurious diagnostics (most severely GFF3, which previously flagged a control-character error on every feature line).
- VCF and BEDPE validation edge cases, and a GFF3 preview crash on a literal `%` in an attribute value.
- Three validator false positives surfaced by real-world caller/portal output.

## [1.2.0] - 2026-06-11

### Added
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4 changes: 2 additions & 2 deletions package-lock.json

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

2 changes: 1 addition & 1 deletion package.json
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Expand Up @@ -2,7 +2,7 @@
"name": "biofmt",
"displayName": "BioFmt",
"description": "View and validate genomics, transcriptomics, and proteomics text formats with syntax highlighting, LSP features, and high-performance previews",
"version": "1.2.0",
"version": "1.3.0",
"publisher": "jfan",
"license": "GPL-3.0",
"workspaces": [
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