Issues

• Compressing the collective knowledge of ESM into a single protein language model | Jingjing's Paper Notebook

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  zhaijj/paper-notebook#11 · Filter by author utterances-bot opened on Apr 1, 2026
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• Continuous Diffusion Transformers for Designing Synthetic Regulatory Elements | Jingjing's Paper Notebook

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  zhaijj/paper-notebook#7 · Filter by author utterances-bot opened on Mar 22, 2026
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• Position-dependent variant effects reveal importance of context in genomic regulation | Jingjing's Paper Notebook

  zhaijj/paper-notebook#6 · Filter by author utterances-bot opened on Mar 22, 2026
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• Genomic Next-Token Predictors are In-Context Learners | Jingjing's Paper Notebook

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  zhaijj/paper-notebook#4 · Filter by author utterances-bot opened on Mar 19, 2026
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• Discovery of a Hematopoietic Manifold in scGPT Yields a Method for Extracting Performant Algorithms from Biological Foundation Model Internals | Jingjing's Paper Notebook

  zhaijj/paper-notebook#3 · Filter by author utterances-bot opened on Mar 14, 2026
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• High-efficiency, transgene-free plant genome editing by viral delivery of an engineered TnpB | Jingjing's Paper Notebook

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  zhaijj/paper-notebook#2 · Filter by author utterances-bot opened on Mar 5, 2026
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• Deep learning-based semantic matching of cis-regulatory DNA sequences facilitates the prediction of gene function | Jingjing's Paper Notebook

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  zhaijj/paper-notebook#1 · Filter by author utterances-bot opened on Mar 4, 2026
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