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@wikipathways

WikiPathways

Open science repository for the development of various WikiPathways components
README.md

Welcome to the WikiPathways Github Organization 👋

👩‍💻 Core Repositories

🙋‍♀️ Help and Disscussion forums

  • Help - Public help forum
  • FAQ - Frequently Asked Questions
  • Pathway Curation Tasks - Prioritized pathway curation tasks; for beginners, advanced and domain-specific authors
  • Dev chat - Developer discussions

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  1. wikipathways-database wikipathways-database Public

    WikiPathways Database

    Shell 19 27

  2. pvjs pvjs Public

    JavaScript-based pathway viewer and editor

    TypeScript 38 19

  3. rWikiPathways rWikiPathways Public

    R package for WikiPathways API

    HTML 20 7

  4. pywikipathways pywikipathways Public

    Python Client Package for WikiPathways

    Python 28 7

Repositories

Showing 10 of 165 repositories
  • wikipathways.github.io Public

    GitHub pages for GPML-Repo

    wikipathways/wikipathways.github.io's past year of commit activity
    HTML 12 26 17 (1 issue needs help) 0 Updated Sep 9, 2026
  • pywikipathways Public

    Python Client Package for WikiPathways

    wikipathways/pywikipathways's past year of commit activity
    Python 28 MIT 7 1 0 Updated Sep 8, 2026
  • wikipathways-assets Public

    Accessory files generated downstream of approved GPMLs

    wikipathways/wikipathways-assets's past year of commit activity
    0 CC0-1.0 1 0 0 Updated Sep 8, 2026
  • wikipathways-database Public

    WikiPathways Database

    wikipathways/wikipathways-database's past year of commit activity
    Shell 19 CC0-1.0 27 17 (1 issue needs help) 1 Updated Sep 8, 2026
  • wikipathways-collection Public
    wikipathways/wikipathways-collection's past year of commit activity
    Java 0 1 1 0 Updated Sep 8, 2026
  • wikipathways-homology Public

    Pathway database for homology-mapped content

    wikipathways/wikipathways-homology's past year of commit activity
    2 CC0-1.0 0 0 0 Updated Sep 5, 2026
  • sandbox-wp.gh.io Public

    Sandbox mirror of wikipathways.github.io

    wikipathways/sandbox-wp.gh.io's past year of commit activity
    HTML 0 1 0 0 Updated Sep 1, 2026
  • WikiPathwaysCurator Public

    Unit tests that validate the WikiPathways content and support the curation of the knowledge base.

    wikipathways/WikiPathwaysCurator's past year of commit activity
    Java 1 MIT 2 12 0 Updated Aug 31, 2026
  • sandbox-wp-assets Public

    Playground for actions dealing with wikipathways-assets repo

    wikipathways/sandbox-wp-assets's past year of commit activity
    0 1 0 0 Updated Aug 27, 2026
  • sandbox-wp-db Public

    Playground for new GPML processing and curation

    wikipathways/sandbox-wp-db's past year of commit activity
    Shell 1 11 10 9 Updated Aug 27, 2026
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