docker-compose.yml

# Local development only. Production is deployed via the GitOps repo
# Rostlab/deploy-protspace-backend (doco-cd) behind the Caddy gateway.
# CORS and rate limiting are handled in-app, so there is no Caddy here.
services:
  protspace-prep:
    build:
      context: .
      dockerfile: apps/prep/Dockerfile
    image: protspace-prep:local
    restart: unless-stopped
    environment:
      PREP_JOB_ROOT: /var/lib/protspace-prep/jobs
      PREP_MAX_CONCURRENT_JOBS: '5'
      PREP_BUNDLE_TTL_SECONDS: '3600'
      PREP_UPLOAD_MAX_BYTES: '8388608'
      PREP_SEQUENCE_MIN_COUNT: '20'
      PREP_SEQUENCE_MAX_COUNT: '1500'
      PREP_SEQUENCE_MAX_RESIDUES: '2000'
      PREP_EMBEDDER: prot_t5
      PREP_METHODS: pca2,umap2
      PREP_ANNOTATIONS: default
      PREP_PIPELINE_TIMEOUT_SECONDS: '420'
      CORS_ALLOWED_ORIGIN: http://localhost:8080
    volumes:
      - prep-jobs:/var/lib/protspace-prep/jobs
    ports:
      - '127.0.0.1:8000:8000'
    healthcheck:
      test: ['CMD', 'curl', '-fsS', 'http://localhost:8000/healthz']
      interval: 30s
      timeout: 5s
      retries: 3
      start_period: 20s

volumes:
  prep-jobs: