Skip to content
View tsenoner's full-sized avatar

Block or report tsenoner

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
tsenoner/README.md

Research

  • protspace · protspace.app · 573,000 protein embeddings as an interactive map, in the browser, from a 45 MB file that never leaves your machine. J. Mol. Biol. 2025
  • plm_choice · 14 protein language models benchmarked across 100 million protein pairs
  • unknown_unknowns · taxonomic bias in protein and genome databases: what is sequenced vs what exists

Learning tools

  • daycipher · live · the weekday of any date, in your head. Staged curriculum, mastery gates, feedback on which step you got wrong
  • cubepath · beginner to 2-Look CFOP, without the dead zone between methods
  • TennisArc · live · radial bracket for the tennis Grand Slams, coloured by time on court

Google Scholar · ORCID · Go (3 kyu) · wildlife photography & birding · running

Pinned Loading

  1. protspace protspace Public

    Explore protein language model embeddings in your browser — surface relationships sequence similarity misses, overlay annotations, and transfer labels (EAT). Nothing uploaded.

    TypeScript 16 4

  2. plm_choice plm_choice Public

    Which pLM to choose? — systematic comparison of 14 protein language model embedding spaces across 100M protein pairs.

    Python 6 2

  3. unknown_unknowns unknown_unknowns Public

    Quantifying taxonomic bias in protein and genome databases — the gap between what is sequenced and what exists.

    Jupyter Notebook

  4. toxprot25 toxprot25 Public

    21 years of Swiss-Prot animal-toxin releases (2005–2025) as a reproducible per-year dataset pipeline.

    Python

  5. daycipher daycipher Public

    Learn to compute the weekday of any date in your head — staged curriculum, mastery gates, per-step feedback. Offline-first PWA.

    TypeScript

  6. TennisArc TennisArc Public

    Live radial bracket for tennis Grand Slams — a zoomable sunburst of the draw, coloured by cumulative time on court.

    TypeScript