tcga-paad

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AlphaMissense-In-PDAC / AlphaMissense-In-PDAC

Evaluating AlphaMissense pathogenicity scores for PDAC diagnostics and molecular subtyping, using TCGA-PAAD and 1000 Genomes data

machine-learning bioinformatics genomics protein-structure tcga cancer-genomics missense-mutations oncology pancreatic-cancer variant-effect-prediction precision-oncology alphafold pdac alphamissense tcga-paad 1000-genomes molecular-subtyping

Updated Jul 13, 2026
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CarolGachema / TCGA-PAAD-NTRK

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R pipeline examining NTRK1/NTRK2 (TrkA/TrkB) expression, co-expression, survival association, and KEGG pathway enrichment in TCGA-PAAD pancreatic cancer, genomic context for a broader hypothesis on convergent TrkA/TrkB signaling in perineural invasion.