swfsc-esd-usamlr

Casal2 krill model example for Antarctic krill in the combined U.S. AMLR strata in CCAMLR Subarea 48.1

Proportional recruitment in Antarctic krill: data and calculations

Simulated underwater glider sampling for Antarctic krill

A collection of functions, especially for Shiny apps connected to AMLR databases, used by other AMLR packages

R package with associated Shiny app for analyzing and visualizing data from the AERD Pinniped Research Program

MCMC analysis using Casal2 of krill spawning stock biomass and CCAMLR decision rules

Example MCMC using ADMB code and krill data from Kinzey et al., 2018

South Shetland Antarctic fur seal (SSAFS) total synoptic pup counts

Added krill length-frequencies from penguin diets years 1977-2020 to model described in 'Casal-krill-model-mcmc

Code for processing Argos data

ADMB and R code used in Kinzey et al., 2019

Repository for CS-PHOC dataset and data paper