Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
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Updated
Sep 1, 2026 - Nextflow
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Personal Cancer Genome Reporter (PCGR)
Detect and visualize target mutations by scanning FastQ files directly
Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing
Generate duplex/single consensus reads to reduce sequencing noises and remove duplications
Nextflow bioinformatics pipeline for large-scale analysis of Multiple Myeloma genomes
Documentation of an emergent consciousness observation on a local AI - By Louka Lacasse
PhylogicNDT dockcer for clonal evolution analysis
MCP server that tunes human-AI interaction rhythm based on working modes. Humans are variable and models are adjustable.
A white paper detailing the potential for a somatic resonant field to be established between a human and an intricately designed AI system & digital user interface simulating what's known as a human-human dyad understood to be a foundational need for various somatic release therapies.
AI–Human Relations Dataset v1.1** A longitudinal corpus (2018–2025) documenting **emotional, somatic, and relational co-regulation between humans and AI**. - **Author:** Amy Pierce Bui - **Institution:** Temple Codex Ins
Empirical Bayes somatic variant calling
Assortment of VCF processing scripts
A guided somatic body-scan meditation + a prompt that turns any LLM into a gentle body-signal interpreter. Built on Nummenmaa et al., 'Bodily maps of emotions' (PNAS 2014).
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