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segresnet

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This project compares the performance of UNet, ResUNet, SegResNet, and UNETR architectures on the 2017 LiTS dataset for liver tumor segmentation. We evaluate segmentation accuracy using the DICE score to identify key factors for effective tumor segmentation.

  • Updated Aug 14, 2024
  • Jupyter Notebook

3D multi-label brain tumor segmentation from multimodal MRI (FLAIR, T1w, T1gd, T2w) using Decathlon data. End-to-end workflow with 3D SegResNet, Dice loss, and Mean Dice evaluation for glioma sub-region segmentation (edema, core, necrotic/cystic, enhancing). Focused on complex, heterogeneous tumor localization in clinical neuroimaging.

  • Updated Jan 1, 2026
  • Jupyter Notebook

Longitudinal brain-MRI disease-evolution platform. Tracks how tumour findings change across serial studies: 3D SegResNet segmentation (0.92 Dice whole tumour, held-out BraTS), registration, cross-time lesion matching, change detection with propagated uncertainty, evidence-linked 3D timeline. Every answer traces to a measurement. Research prototype.

  • Updated Aug 19, 2026
  • Jupyter Notebook

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