score-matrix

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Here are 4 public repositories matching this topic...

lignum-vitae / biobase

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A home for all biological/bioinformatics constants from protein strings to BLOSUM matrices.

Updated May 1, 2026
Python

StanIsAdmin / PyProt

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A set of libraries for aligning, profiling, and predicting the structure of proteins

protein alignment profiling amino-acids substitutions score-matrix structure-prediction

Updated Nov 1, 2017
Python

kullrich / MSA2dist

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MSA2dist calculates pairwise distances for DNAStringSet/AAStringSet using custom scoring, conducts codon analyses (including dNdS), and estimates Dxy/FST

bioinformatics r dnds-estimation score-matrix dnds multiple-sequence-alignment bioconductor-package iupac msa2dist kaks

Updated Jun 26, 2026
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HyejinWon / calculate-score

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my implementation calculate precision, recall, f1, accuracy, and GLEU score

recall score f1 precision score-matrix

Updated Mar 23, 2021
Python

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