A collection of manuals for the software tools used in mechanosensitive ion channel research, single-molecule imaging, and cell biology
Open-source framework predicting ultrasound neuromodulation: transcranial acoustic field to per-voxel neural firing maps, via mechanosensitive ion channels, intramembrane cavitation, and a multi-pathway Hodgkin-Huxley neuron.
Python pipeline for analyzing PIEZO1 protein localization and cell edge dynamics using fluorescence microscopy data.
Python code created for the Pathak lab to help analyze TIRF recordings of PIEZO1.
Supplementary Data for Pillai et al., 2026.
GUI application for analyzing the relationship between cell-membrane curvature and PIEZO1 protein locations from fluorescence microscope recordings
Modular pipeline combining DECODE localization, MAGIK tracking, and ROI-based calcium analysis
A Python-based application for analyzing PIEZO1 protein distribution and membrane dynamics using TIRF microscopy data.
Reproducible same-structure multi-tool pocket consensus pipeline for PIEZO1 virtual screening
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