Simulate PK-PD models defined as ODE systems
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Aug 28, 2026 - R
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pharmacodynamics
Here are 45 public repositories matching this topic...
Population Experimental Design (PopED) in R
cran r population pharmacometrics pharmacokinetics optimal-design population-model nlme pharmacodynamics pkpd
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Aug 17, 2026 - R
PIPET 수련생을 위한 실습교육자료입니다. (R, NCA, Rmarkdown, data science, 임상시험, 약동학/약력학, 논문발표 등)
data-science clinical-trials interns noncompartmental-analysis pharmacokinetics pipet pharmacodynamics drug-development regulatory-science
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May 22, 2024 - HTML
Chi is an open source Python package which is designed for PKPD modelling and model-informed precision dosing (MIPD).
python parameter-estimation bayesian-inference pharmacokinetics nlme pharmacodynamics pkpd pkpd-modelling mipd model-informed-precision-dosing non-linear-mixed-effects
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May 23, 2026 - Python
PySB add-on providing domain-specific macros and models for empirical and mechanistic PK/PD modeling.
systems-pharmacology pharmacometrics pharmacokinetics pharmacodynamics pkpd quantitative-systems-pharmacology pkpd-modelling quantitative-systems-toxicology mechanistic-modeling
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Jun 13, 2025 - Jupyter Notebook
Software tool for the compilation of Heta-based QSP modeling platform
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Aug 27, 2026 - JavaScript
Predicting pharmacodynamic responses to cancer drugs using cell morphology
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Oct 19, 2024 - Jupyter Notebook
Non-compartmental pharmacokinetics analysis for Julia.
medicine julia pharmacology clinical-trials pharmacokinetics nca bioequivalence pharmacodynamics clinical-trial drug-development
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Sep 8, 2026 - Julia
Description of work done at Merck pharmaceutical company in the summer of 2018 as a Computational Drug Discovery Intern at West Point, PA. Information excludes all proprietary information belonging to Merck & Co.
python computer-science research xml high-performance numpy drug-discovery proteomics publication lc-ms pharmacokinetics labkey scalable-data-analysis computational-proteomics drug-targets swissprot pharmaceuticals pharmacodynamics tkinter-python drug-development
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Mar 10, 2022 - Python
📝 2016, 2017, 2018, 2019 서울아산병원 임상약리학과에 실습 나온 것을 환영합니다. 서브인턴들의 교육을 위해 필요한 자료를 모아두었습니다.
data-science r medicine medical-education pharmacokinetics clinical-pharmacology pharmacodynamics drug-development
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Jan 23, 2019 - HTML
Simulation of pharmacodynamic models of drug-GPCR (class A) interactions.
bioinformatics structural-biology systems-biology bioinformatics-pipeline pharmacodynamics bioinformatics-tool gpcr
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Nov 17, 2025 - Python
Project archive for the Systems Pharmacology & Personalized Medicine course at JHU during Spring 2021 Semester
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May 14, 2021 - R
A Python library for automated PK/PD ODE model identification from concentration–time data. Selects the compartmental structure, estimates parameters, and flags identifiability problems; no model specification or starting values required.
python computational-biology artificial-intelligence ode scientific-computing model-selection pharmacometrics system-identification pharmacokinetics identifiability pharmacodynamics pkpd drug-development compartmental-model
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Aug 21, 2026 - Python
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Sep 3, 2026 - R
가이드라인: 임상시험의 통계 원칙 - 식품의약품안전처 식품의약품안전평가원 의약품심사부 의약품심사조정과 https://pipetcpt.github.io/book-stat
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Apr 22, 2020 - CSS
Open Python Web App for Pharmcological Modeling and Analysis
pharmacometrics noncompartmental-analysis pharmacokinetics pharmacodynamics compartmental-models pkpd
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Oct 25, 2024 - Python
An MCP server providing AI assistants with access to MATLAB SimBiology for modelling, simulating, and analyzing biological systems
python bioinformatics simulation mcp matlab systems-biology computational-biology drug-discovery pharmacokinetics ai-agents claude mathematical-modeling pharmacodynamics pkpd biological-modeling matlab-engine simbiology llm model-context-protocol fastmcp
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Jul 24, 2026 - Python
서울아산병원 임상약리학과에서 운영하는 http://r.acr.kr 는 R 패키지 리포입니다. CRAN에 공개하기 전, 본 기관에서 개발한 패키지의 개발 버전이 올라옵니다. 또한 기존 패키지를 용도에 맞게 변형한 fork를 올리고 있습니다.
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May 27, 2020 - TeX
RAIR-Sim: MATLAB compartmental simulator of radioactive iodine (RAI) therapy response in metastatic thyroid cancer (activity decay, tumor growth, thyroglobulin kinetics). Fork of MarieFG49/CTD_SIMU_RAI with documentation, citation metadata, and a bug fix (missing .m extension on the main simulator).
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Jul 22, 2026 - MATLAB
Simulate the absorption and elimination of drugs in real time using pharmacokinetic formulas.
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Oct 1, 2024 - Python
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