MucOneUp simulates diploid MUC1 VNTR references with variable repeats, targeted mutations, and toxic protein detection. It also integrates an Illumina read simulation pipeline for comprehensive genomic benchmarking.
VNtyper Online Backend is a Dockerized pipeline that handles alignment-free MUC1 VNTR genotyping for autosomal dominant tubulointerstitial kidney disease (ADTKD). It exposes a frontend and REST API for job submission, orchestrates asynchronous tasks, and integrates multiple modules to streamline variant analysis for short-read sequencing data.
Frontend for vntyper.org, a web tool to perform alignment-free genotyping of the MUC1 VNTR using short-read sequencing data. This site automatically extracts MUC1 data in your browser and uploads only the minimal subset needed for genotyping.
To associate your repository with the muc1 topic, visit your repo's landing page and select "manage topics."