Automated brain tumor segmentation pipeline using 3D Slicer + ITK-SNAP. Multi-sequence MRI preprocessing, threshold segmentation, volumetric analysis, and batch processing.
-
Updated
May 26, 2026 - Python
Automated brain tumor segmentation pipeline using 3D Slicer + ITK-SNAP. Multi-sequence MRI preprocessing, threshold segmentation, volumetric analysis, and batch processing.
ITK-SNAP fork adding segmentation editing directly in the 3D view: surface brush, delete island, bridge, fill hole
Add a description, image, and links to the itk-snap topic page so that developers can more easily learn about it.
To associate your repository with the itk-snap topic, visit your repo's landing page and select "manage topics."