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brats2023

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Code for automated brain tumor segmentation from MRI scans using CNNs with attention mechanisms, deep supervision, and Swin-Transformers. Based on my Master's dissertation project at Brunel University, it features 3 deep learning models, showcasing integration of advanced techniques in medical image analysis.

  • Updated Nov 17, 2023
  • Python

Multi-metric framework for quantitatively validating GNN explanations in brain tumor segmentation. It evaluates GraphSAGE, GAT, and ChebNet with Integrated Gradients, GraphLIME, and GNNExplainer on BraTS 2023 supervoxel graphs.

  • Updated Jul 31, 2026
  • Jupyter Notebook

Distance Map auxiliary loss for brain tumor segmentation (BraTS 2023 GLI) : characterisation of a topological fragments artefact + parameter-free CC-consensus filter improving HD95 NCR. Paper, code, reproducibility data.

  • Updated Jul 4, 2026
  • Python

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