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aracne-network

Here are 3 public repositories matching this topic...

climatechangemicrobiology / ProGRN

Prokaryote Gene Regulatory Network (ProGRN) Inference Pipeline

machine-learning gene random-forest gene-expression microbiology bacteria transcriptomics regulatory-network methane multi-omics gene-regulatory-network methanotrophy genie3 regulatory-genomics gene-regulatory-network-inference aracne-network methylotroph methylomonas

Updated Apr 4, 2025
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IbrahimElzahaby / Microarray_Mtb

Biological network analysis of Mtb

pca-analysis cytoscape network-analysis qqplots clr-network aracne-network go-biological-process mrnet-network

Updated Jun 19, 2023
R

Korkmaz-Lab / TF-Activity-VIPER-Workflow

Methods reference for transcription factor activity inference using ARACNe-AP and VIPER, with DoRothEA as a curated alternative.

r viper dorothea aracne-network

Updated Jun 18, 2026

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