TuttiFrutti is a collection of R functions and R scripts for various utilities and tools with a focus on animal breeding and genomics.
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Updated
Jan 16, 2025 - R
TuttiFrutti is a collection of R functions and R scripts for various utilities and tools with a focus on animal breeding and genomics.
🐄 🔬 💻 Repository of tools for data analysis in genomics and animal genetic improvement.
Genetic evaluation in R: AI-REML variance components, breeding values and single-step genomics (ssGBLUP, APY), with reaction norms, indirect genetic effects, multi-trait, threshold and survival models. The numerics are C++ inside the package, with no run-time dependency.
BreederHQ Marketing Website - Built with Astro + Tailwind CSS
Animal breeding, care, ownership, and mount stats for TFMC Minecraft servers.
🕊 This repository is associated with the manuscript Pacheco et al. (2020).
Free herd tracker and breeding planner for the survival game Icarus. Manage tamed animals, bloodlines, phenotypes and breeding pairs.
Исследовательский проект по информатике для допуска к экзамену.
Showcase, toy example of End-to-end GWAS pipeline: population simulation, REML heritability, Manhattan/QQ plots — Python + R
Using Computational Intelligence and Machine Learning methods for trait prediction in genetic improvement (plant breeding) programs.
R implementation for meBLUP
Анализ генетических данных в R с использованием BLUP. Смешанные линейные модели, подготовка данных и оценка генетической ценности
Reproducible computational workflow accompanying an MSc study of genomic diversity and autozygosity in South African Merino sheep using SNP genotype data.
Reproducible genomic prediction study comparing L1/L2-regularized artificial neural networks with GBLUP-ADE under a frozen cross-validation design, using canonical simulated-data workflows, workflowr, and renv.
Linked Data Platform for Animal Breeding & Genomics
Get FarmVille 2: Country Escape — a management game for Windows with free download. Grow fruit and vegetables, breed animals, and customize your farm while enjoying daily rewards. Free setup for Windows.
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