ai-assisted-research

GitHub template for autonomous strategic research using Claude Code

Local-first, user-governed Research Room for structured AI-assisted research deliberation.

Agent skills for systematic review, meta-analysis, umbrella review, and AI-assisted evidence synthesis.

A file-based governance harness that turns loose research ideas into proposals that hold up. Makes three things checkable: which page a claim rests on, what would refute it, and what the AI just changed. Human stays the sole adjudicator. Bilingual (EN / 繁中).

A small, docs-first workflow for AI-assisted research that keeps claims, sources, uncertainty, review findings and human decisions inspectable.

Provide one research direction, it will generate entire project and complete research paper for you. Can generate many more types of documents!

Human-led, evidence-gated full-cycle research execution for Codex and Claude Code · 人类主导的科研全流程辅助工具

Safe, repeatable Codex-assisted family-history research workflows for FamilySearch.org

Open research repository for inclusive charm semileptonic decays, HQET/OPE, and reproducible thesis-source workflows.

Formal Verification of Whittaker-Type Zero-Invariant Fields and Receiver Symmetry Breaking in Lean 4 and SystemVerilog.

Geometric Exclusion of Smooth Solutions to Navier-Stokes Equations at Stationary Right-Angles under No-Slip Boundary Conditions in Lean 4.

Generative AI is the best research tool we have available today - it also messes up a lot. This harness consists of the deterministic controls to perform AI-assisted research quickly, accurately and honestly.

Make academic field conventions explicit, comparable, and teachable — for researchers working across disciplines. Built for Claude Code.

Reproducible re-analysis on two human EPIC datasets asking whether partial epigenetic reprogramming reverts the causal-damage (DamAge) or the adaptive (AdaptAge) methylation layer — the two layers dissociate, and the dissociation replicates.

Research & reading marginalia — selective bilingual (EN/中文) AI-assisted research notes, each with full provenance: data source · initial prompt · date · model.

NexMol is a desktop app for molecular visualization and AI-assisted structural analysis. It combines an interactive 3D viewer with a natural-language workflow, so users can explore structures, manage projects, and work with molecular data more efficiently in one place.

Public front door to a one-person, AI-assisted interdisciplinary research program on information and its future-reachability — how reachability is created, stored, degraded, and repaired in physical, living, and cognitive systems.

Evidence-governed research toolkit with Gauntlet process assurance and FOIL adaptive reasoning support.

A foundational theory redefining "existence" as quantizable via constructive logic. Applicable to AI cognition, encryption, quantum memory, and beyond. 構成的論理により「存在」を量子化可能な単位として再定義。AI認知・暗号・量子記憶など幅広い応用を想定した基礎理論です。

A claim-centric, temporally-aware LLM wiki for long-term scientific literature management.