tiwowi · tomaszaba · Dec 10, 2025 · Dec 10, 2025 · Dec 10, 2025 · Dec 10, 2025
diff --git a/CITATION.cff b/CITATION.cff
@@ -99,7 +99,7 @@ references:
   abstract: 'mwana: An Efficient Workflow for Plausibility Checks and Prevalence Analysis
     of Wasting in R'
   notes: Imports
-  url: https://nutriverse.io/mwana
+  url: https://mphimo.github.io/mwana/
   authors:
   - family-names: Zaba
     given-names: Tomás
@@ -111,7 +111,7 @@ references:
   - family-names: Myatt
     given-names: Mark
   year: '2025'
-  version: '>= 1.0.0'
+  version: '>= 0.2.3'
 - type: software
   title: withr
   abstract: 'withr: Run Code ''With'' Temporarily Modified Global State'
@@ -193,6 +193,10 @@ references:
     given-names: Barret
     email: barret@posit.co
     orcid: https://orcid.org/0000-0001-9986-114X
+  - family-names: Aden-Buie
+    given-names: Garrick
+    email: garrick@adenbuie.com
+    orcid: https://orcid.org/0000-0002-7111-0077
   - family-names: Xie
     given-names: Yihui
     email: yihui@posit.co

diff --git a/DESCRIPTION b/DESCRIPTION
@@ -22,7 +22,7 @@ Imports:
     dplyr (>= 1.1.4),
     rlang (>= 1.1.6),
     rsatscan (>= 1.0.9),
-    mwana (>= 1.0.0),
+    mwana (>= 0.2.3),
     withr (>= 3.0.2),
     stringr (>= 1.5.1),
     tibble (>= 3.3.0),
@@ -41,7 +41,7 @@ Suggests:
     spelling (>= 2.3.1),
     testthat (>= 3.0.0)
 Remotes:
-    nutriverse/mwana
+    mphimo/mwana
 Config/testthat/edition: 3
 Depends: 
     R (>= 4.1.0)

diff --git a/R/data-wranglers.R b/R/data-wranglers.R
@@ -59,7 +59,7 @@ wrangle_data <- function(
 #'  readable by the software, and placed in a directory it can access.
 #'
 #' `ww_wrangle_data()` is a convenient function designed for this task. It
-#' assumes that the input anthropometric data has been pre-processed using the
+#' assumes that the input anthropometric data has been pre-processed using
 #' `{mwana}` data wrangling functions.
 #'
 #' @param .data A data frame object that has been wrangled using
@@ -84,7 +84,7 @@ wrangle_data <- function(
 #' variable must be named "latitude".
 #'
 #' @returns
-#' Three files are created and saved in the user-defined directory as specifiie 
+#' Three files are created and saved in the user-defined directory as specified 
 #' in the `dir` argument: a `.cas` file for cases, a `.ctl` for controls, and
 #' a `.geo` file for geographical coordinates. The full filenames will incorporate
 #' the use-defined `filename` string.
@@ -117,7 +117,7 @@ wrangle_data <- function(
 #'   mwana::define_wasting(
 #'     zscores = wfhz,
 #'     .by = "zscores",
-#'     edema = oedema
+#'     oedema = oedema
 #'   )
 #'
 #' ## Apply the function ----

diff --git a/R/module-data-wrangling.R b/R/module-data-wrangling.R
@@ -134,7 +134,7 @@ module_server_wrangle_data <- function(id, data) {
             ),
             shiny::selectInput(
               inputId = ns("oedema"),
-              label = htmltools::tags$span("Oedema",
+              label = htmltools::tags$span("oedema",
                 style = "font-size: 14px; font-weight: bold;"
               ),
               choices = c("", cols)
@@ -174,7 +174,7 @@ module_server_wrangle_data <- function(id, data) {
             ),
             shiny::selectInput(
               inputId = ns("oedema"),
-              label = htmltools::tags$span("Oedema",
+              label = htmltools::tags$span("oedema",
                 style = "font-size: 14px; font-weight: bold;"
               ),
               choices = c("", cols)
@@ -234,7 +234,7 @@ module_server_wrangle_data <- function(id, data) {
             ),
             shiny::selectInput(
               inputId = ns("oedema"),
-              label = htmltools::tags$span("Oedema",
+              label = htmltools::tags$span("oedema",
                 style = "font-size: 14px; font-weight: bold;"
               ),
               choices = c("", cols)
@@ -303,7 +303,7 @@ module_server_wrangle_data <- function(id, data) {
                   mwana::define_wasting(
                     zscores = .data$wfhz,
                     .by = "zscores",
-                    edema = if (input$oedema != "") !!rlang::sym(input$oedema) else NULL
+                    oedema = if (input$oedema != "") !!rlang::sym(input$oedema) else NULL
                   )
               },
               "muac" = {
@@ -332,7 +332,7 @@ module_server_wrangle_data <- function(id, data) {
                   mwana::define_wasting(
                     muac = .data$muac,
                     .by = "muac",
-                    edema = if (input$oedema != "") !!rlang::sym(input$oedema) else NULL
+                    oedema = if (input$oedema != "") !!rlang::sym(input$oedema) else NULL
                   )
               },
               "combined" = {
@@ -372,7 +372,7 @@ module_server_wrangle_data <- function(id, data) {
                     zscores = .data$wfhz,
                     muac = .data$muac,
                     .by = "combined",
-                    edema = if (input$oedema != "") !!rlang::sym(input$oedema) else NULL
+                    oedema = if (input$oedema != "") !!rlang::sym(input$oedema) else NULL
                   )
               }
             )

diff --git a/R/satscan-configuration.R b/R/satscan-configuration.R
@@ -51,7 +51,7 @@
 #'   mwana::define_wasting(
 #'     zscores = wfhz,
 #'     .by = "zscores",
-#'     edema = oedema
+#'     oedema = oedema
 #'   )
 #'
 #' ## Apply the function ----

diff --git a/R/satscan-runner.R b/R/satscan-runner.R
@@ -94,7 +94,7 @@
 #'   mwana::define_wasting(
 #'     zscores = wfhz,
 #'     .by = "zscores",
-#'     edema = oedema
+#'     oedema = oedema
 #'   )
 #'
 #' #' ## Given a temporary directory ----

diff --git a/inst/WORDLIST b/inst/WORDLIST
@@ -19,4 +19,5 @@ muac
 satscan
 shapefiles
 tibble
+walkthrough
 ️
diff --git a/inst/app/ui.R b/inst/app/ui.R
@@ -43,7 +43,7 @@ ui <- tagList(
       ),
 
       ### Right side of the page navigation bar ----
-      tags$span("v.1.0.1",
+      tags$span("v1.0.1",
         id = "app-version",
         style = "font-size: 12.5px; color:  rgba(31, 42, 68, 0.58);
         position: fixed; top: 40px; right: 20px;"

diff --git a/man/ww_configure_satscan.Rd b/man/ww_configure_satscan.Rd
diff --git a/man/ww_run_satscan.Rd b/man/ww_run_satscan.Rd
diff --git a/man/ww_wrangle_data.Rd b/man/ww_wrangle_data.Rd
diff --git a/tests/testthat/test-data-wranglers.R b/tests/testthat/test-data-wranglers.R
@@ -24,7 +24,7 @@ testthat::test_that(
       mwana::define_wasting(
         zscores = wfhz,
         .by = "zscores",
-        edema = oedema
+        oedema = oedema
       )
 
     ## Observed results ----
@@ -69,7 +69,7 @@ testthat::test_that(
         .to = "cm"
       ) |>
       dplyr::mutate(muac = mwana::recode_muac(muac, .to = "mm")) |>
-      mwana::define_wasting(muac = muac, .by = "muac", edema = oedema)
+      mwana::define_wasting(muac = muac, .by = "muac", oedema = oedema)
 
 
     ## Observed results ----
@@ -124,7 +124,7 @@ testthat::test_that(
         zscores = wfhz,
         muac = muac,
         .by = "combined",
-        edema = oedema
+        oedema = oedema
       )
 
     ### Observed results ----
@@ -172,7 +172,7 @@ testthat::test_that(
       mwana::define_wasting(
         zscores = wfhz,
         .by = "zscores",
-        edema = oedema
+        oedema = oedema
       )
 
     ### Create a temporary directory ----

diff --git a/tests/testthat/test-satscan-configuration.R b/tests/testthat/test-satscan-configuration.R
@@ -24,7 +24,7 @@ testthat::test_that(
       mwana::define_wasting(
         zscores = wfhz,
         .by = "zscores",
-        edema = oedema
+        oedema = oedema
       )
 
     ### Create a temporary directory ----

diff --git a/tests/testthat/test-satscan-runner.R b/tests/testthat/test-satscan-runner.R
@@ -26,7 +26,7 @@ testthat::test_that(
       mwana::define_wasting(
         zscores = wfhz,
         .by = "zscores",
-        edema = oedema
+        oedema = oedema
       )
 
     ### Create a temporary directory ----
@@ -94,7 +94,7 @@ testthat::test_that(
       mwana::define_wasting(
         zscores = wfhz,
         .by = "zscores",
-        edema = oedema
+        oedema = oedema
       )
 
     ### Create a temporary directory ----
@@ -166,7 +166,7 @@ testthat::test_that(
       mwana::define_wasting(
         zscores = wfhz,
         .by = "zscores",
-        edema = oedema
+        oedema = oedema
       )
 
     ### Create a temporary directory ----

diff --git a/tests/testthat/test-utils.R b/tests/testthat/test-utils.R
@@ -23,7 +23,7 @@ testthat::test_that(
       mwana::define_wasting(
         zscores = wfhz,
         .by = "zscores",
-        edema = oedema
+        oedema = oedema
       )
 
     ### Create a temporary directory ----

diff --git a/vignettes/how-to-use-wowi.qmd b/vignettes/how-to-use-wowi.qmd
@@ -63,7 +63,7 @@ The output described in point 4 offers an IPC Acute Malnutrition-related insight
 
 ## From data to clusters - the wowi analysis workflow 
 
-The analysis workflow with `wowi` begins with the standard anthropometric data processing steps - data wrangling and quality checks. For this purpose, wowi relies on the [`mwana`](https://nutriverse.io/mwana/dev/) package, which will be installed or updated automatically when you install `wowi`. Moreover, in the downstream analysis workflow, the `sf` package is required to generate shapefile-related outputs. Note that [`sf`](https://r-spatial.github.io/sf/) is not installed with wowi, therefore you must install it separately.
+The analysis workflow with `wowi` begins with the standard anthropometric data processing steps - data wrangling and quality checks. For this purpose, wowi relies on the [`mwana`](https://https://mphimo.github.io/mwana/) package, which will be installed or updated automatically when you install `wowi`. Moreover, in the downstream analysis workflow, the `sf` package is required to generate shapefile-related outputs. Note that [`sf`](https://r-spatial.github.io/sf/) is not installed with wowi, therefore you must install it separately.
 
 ::: {.callout-note}
 
@@ -106,7 +106,7 @@ a <- anthro |>
   ) |>
   define_wasting(
     zscores = wfhz,
-    edema = oedema,
+    oedema = oedema,
     .by = "zscores"
   ) |>
   dplyr::rename(
@@ -115,7 +115,7 @@ a <- anthro |>
   )
 ```
 
-Hereafter, you can check the quality of the data. Learn how to do so [here](https://nutriverse.io/mwana/dev/articles/plausibility.html).
+Hereafter, you can check the quality of the data. Learn how to do so [here](https://https://mphimo.github.io/mwana/articles/plausibility.html).
 
 ### Running the spatial scan
-Original file line number
+Diff line change
@@ Expand Up / @@ -19,4 +19,5 @@ muac @@
     satscan
     shapefiles
     tibble
+    walkthrough
     ️