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produce() writes to root when output.dir is set to "./"

Status: Open.

#299 In ssadedin/bpipe;

· olliecheng opened on Apr 21, 2026

Problem with picard CollectHsMetrics - bpipe expecting an output file that was not defined as such

Status: Open.

#295 In ssadedin/bpipe;

· deyanyosifov opened on Mar 3, 2025

Misleading INFO message.

Status: Open.

#294 In ssadedin/bpipe;

· drtconway opened on Feb 6, 2025

bpipe --help returns status code = 1

Status: Open.

#292 In ssadedin/bpipe;

· martin-g opened on Jul 2, 2024

Null PID reference

Status: Open.

#290 In ssadedin/bpipe;

· kevinkovalchik opened on May 23, 2024

Activate conda environment and execute command

Status: Open.

#285 In ssadedin/bpipe;

· nikhilshinde0909 opened on Jun 10, 2023

Skip command start for "my command" due to probe mode

Status: Open.

#284 In ssadedin/bpipe;

· L-of-IOS opened on May 23, 2023

bpipe via Conda throws java.lang.NoClassDefFoundError

Status: Open.

#283 In ssadedin/bpipe;

· marvel64 opened on Mar 22, 2023

A fixed error reappeared

Status: Open.

#282 In ssadedin/bpipe;

· L-of-IOS opened on Mar 6, 2023

Installing error in Bpipe on M1 Mac

Status: Open.

#281 In ssadedin/bpipe;

· Mercilena opened on Feb 12, 2023

slurm scheduler not working with slurm-wlm-torque qstat

Status: Open.

#280 In ssadedin/bpipe;

· nemartins opened on Jan 3, 2023

Significant number of critical vulnerabilities reported in dependencies

Status: Open.

#273 In ssadedin/bpipe;

· slagelwa opened on Jun 20, 2022