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11 changes: 7 additions & 4 deletions README.md
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<img src="stickers/QFeaturesGUI.png" align="right" height="139" alt="" />

**QFeaturesGUI** is a collection of Shiny applications that provide graphical
user interfaces for MS-based proteomics data analysis using the Bioconductor
user interfaces for MS-based proteomics data analysis using the
[R for Mass Spectrometry](https://www.rformassspectrometry.org/)/[Bioconductor](https://bioconductor.org/)
ecosystem. It supports both **bulk** and **single-cell proteomics (SCP)**
workflows and builds on the
[`QFeatures`](https://www.bioconductor.org/packages/release/bioc/html/QFeatures.html) and
[`scp`](https://bioconductor.org/packages/release/bioc/html/scp.html) packages.

Rather than a single application, QFeaturesGUI is composed of
multiple apps, each dedicated to a specific step of the proteomics data
multiple apps, each dedicated to specific steps of the proteomics data
analysis workflow.


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- [`msqrob2`](https://www.bioconductor.org/packages/release/bioc/html/msqrob2.html)
Robust statistical inference for quantitative LC-MS proteomics

- [`RforMassSpectrometry`](https://www.rformassspectrometry.org/)
A collection of R packages for the analysis and interpretation of mass
spectrometry data.
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## Contributing

Contributions to `QFeaturesGUI` are welcome. This includes bug reports,
Contributions to `QFeaturesGUI` are welcome. These include bug reports,
feature requests, and suggestions for new applications or improvements to
existing ones.
existing ones. Contributors agree to abide by the terms of the project
[Code of Conduct](https://rformassspectrometry.github.io/RforMassSpectrometry/articles/RforMassSpectrometry.html#code-of-conduct).

Issues and enhancement requests can be submitted via the
[GitHub issue tracker](https://github.com/rformassspectrometry/QFeaturesGUI/issues).
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