This repository contains resources related to the manuscript describing Counting De Bruijn Graphs.
Lossless Indexing with Counting de Bruijn Graphs
Mikhail Karasikov, Harun Mustafa, Gunnar Rätsch, André Kahles
Genome Res. 2022; doi: https://doi.org/10.1101/gr.276607.122
The algorithms and the Counting DBG data structure itself are implemented within MetaGraph.
Note: all alignment experiments with MetaGraph were run on commit 121c1d9.