Hi,
I think this work is interesting and I got some bins affiliated with same genus from metagenomes recently. So I am trying to constructed pangenome network based on them.
Should I treat them as isolated genomes or just assemblies from metagenome?
And could I just use their nt sequences as input or I have to predict and annotate the genes then combine them into a single file?
Thanks in advance!
Hi,
I think this work is interesting and I got some bins affiliated with same genus from metagenomes recently. So I am trying to constructed pangenome network based on them.
Should I treat them as isolated genomes or just assemblies from metagenome?
And could I just use their nt sequences as input or I have to predict and annotate the genes then combine them into a single file?
Thanks in advance!