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@mi-erasmusmc Department of Medical Informatics, Erasmus MC

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    Repositories list

    134 repositories

    • studyGenerics

      Public
      Tested methods to execute OMOP studies
      R
      •
      Apache License 2.0
      •0•0•20•1•Updated Sep 8, 2026Sep 8, 2026

    • oncomop

      Public
      Methods to Analyze Oncological Data In The OMOP-CDM
      R
      •
      Apache License 2.0
      •0•0•3•0•Updated Sep 8, 2026Sep 8, 2026

    • omop-practitioner-2026

      Public
      R
      •0•0•0•0•Updated Sep 7, 2026Sep 7, 2026

    • DataQualityDashboard

      Public
      A tool to help improve data quality standards in observational data science.
      JavaScript
      •114•0•0•0•Updated Sep 7, 2026Sep 7, 2026

    • H2O-visualizations

      Public
      R
      •
      MIT License
      •0•0•0•1•Updated Sep 4, 2026Sep 4, 2026

    • JCdmBuilder

      Public
      JCdmBuilder is a Java program that can be used to transform observational datasets from their native formats and schemas into the OMOP Common Data Model.
      R
      •8•1•2•0•Updated Aug 31, 2026Aug 31, 2026

    • AssociationRuleMining

      Public
      An R package that implements association rule mining and frequent pattern mining against the OMOP-CDM
      R
      •1•1•2•0•Updated Aug 21, 2026Aug 21, 2026

    • JANE

      Public
      The source code for the Journal / Author Name Estimator (JANE)
      Java
      •1•6•0•0•Updated Jul 31, 2026Jul 31, 2026

    • proteus

      Public
      shows how concepts change between vocabulary releases
      Rust
      •0•0•0•0•Updated Jul 30, 2026Jul 30, 2026

    • ema-authorised-to-rxnorm-mappings

      Public
      Mappings from European Medicines Agency (EMA) authorised medicinal products to RxNorm.
      Python
      •1•6•0•0•Updated Jul 23, 2026Jul 23, 2026

    • DelphiDepot

      Public
      A repository containing the prediction models in the DELPHI library
      1•0•0•0•Updated Jul 12, 2026Jul 12, 2026

    • launchPro

      Public
      Python CLI for opening local RStudio projects
      Python
      •
      Apache License 2.0
      •0•1•0•0•Updated Jun 30, 2026Jun 30, 2026

    • pred-under-missingness

      Public
      R
      •0•0•0•0•Updated Jun 25, 2026Jun 25, 2026

    • PatientGeneratorPosit

      Public
      R
      •0•0•0•0•Updated Jun 3, 2026Jun 3, 2026

    • multilevel_dili

      Public
      Context-aware multilevel classification of semantic relations in drug-adverse drug reaction (ADR) networks – predicting drug-induced liver injury (DILI) as a ca…
      Scheme
      •0•2•0•0•Updated Jun 3, 2026Jun 3, 2026

    • EvaluationMetricStudy

      Public
      R
      •0•0•0•0•Updated Jun 2, 2026Jun 2, 2026

    • FederatedLearning

      Public
      Framework for running federated learning experiments
      R
      •0•1•9•0•Updated Jun 1, 2026Jun 1, 2026

    • Multimorbidity

      Public
      An R package to perform characterisation and analytical studies with focus on multi-morbidities.
      R
      •
      MIT License
      •1•0•1•0•Updated Mar 21, 2026Mar 21, 2026

    • LearningCurvesIndividualInstability

      Public
      R
      •0•0•0•0•Updated Mar 12, 2026Mar 12, 2026

    • OhdsiShinyModules

      Public
      An R package containing Shiny modules used by various OHDSI Shiny apps
      R
      •13•0•0•0•Updated Mar 4, 2026Mar 4, 2026

    • OhdsiReportGenerator

      Public
      Code to extract data from the OHDSI results structure and generate plots, presentations and reports
      R
      •4•0•0•0•Updated Mar 4, 2026Mar 4, 2026

    • Dracula

      Public
      A drug - adverse event mapper for clinicaltrials.gov
      Rust
      •
      Apache License 2.0
      •0•0•0•0•Updated Mar 3, 2026Mar 3, 2026

    • foundational-methods

      Public
      Onboarding material for the foundational methods pillar
      0•0•0•0•Updated Mar 2, 2026Mar 2, 2026

    • codex-usage

      Public
      Analyze your codex usage cost
      Python
      •
      Apache License 2.0
      •1•2•0•0•Updated Feb 19, 2026Feb 19, 2026

    • Mitos

      Public
      Python
      •0•1•0•0•Updated Jan 30, 2026Jan 30, 2026

    • PlpBenchmarks

      Public
      An R package to host RWD benchmark tasks for prediction and assess comparative analyses using the OMOP-CDM.
      benchmarksomop-cdmpatientlevelprediction
      benchmarksomop-cdmpatientlevelprediction
      R
      •
      Apache License 2.0
      •1•2•4•0•Updated Dec 20, 2025Dec 20, 2025

    • PatientLevelPrediction

      Public
      An R package for performing patient level prediction.
      HTML
      •95•4•0•1•Updated Nov 18, 2025Nov 18, 2025

    • comap

      Public
      The ADVANCE CodeMapper tool
      Jupyter Notebook
      •
      GNU Affero General Public License v3.0
      •0•4•0•5•Updated Sep 18, 2025Sep 18, 2025

    • ets-rosetta-stone

      Public
      eTransafe Rosetta Stone is a terminology translation tool
      Java
      •
      Apache License 2.0
      •1•2•0•0•Updated Aug 26, 2025Aug 26, 2025

    • transferLearning

      Public
      R
      •0•0•0•0•Updated May 9, 2025May 9, 2025
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