Skip to content

@gnames gnames

All

    Repositories list

    63 repositories

    • gnfinder

      Public
      GNfinder finds scientific names in UTF8 texts, PDF files, MS Word/Excel documents, URLs etc.
      bioinformaticsbiodiversity-informaticsbiodiversity-heritage-library
      bioinformaticsbiodiversity-informaticsbiodiversity-heritage-library
      Go
      •
      MIT License
      •5•54•20•1•Updated Oct 12, 2026Oct 12, 2026

    • gndb

      Public
      GNdb creates and populates database that enables install of GNverifier locally or remotely.
      Go
      •
      MIT License
      •0•0•0•0•Updated Oct 9, 2026Oct 9, 2026

    • gnparser

      Public
      GNparser normalises scientific names and extracts their semantic elements.
      parserbioinformaticsnomenclature
      parserbioinformaticsnomenclaturebiodiversityscientific-names
      Go
      •
      MIT License
      •7•55•14•0•Updated Oct 9, 2026Oct 9, 2026

    • tree-sitter-peg

      Public
      Tree-Sitter rules for Parsing Expression Grammar
      C
      •1•2•0•0•Updated Jul 16, 2026Jul 16, 2026

    • gnverifier

      Public
      GNverifier verifies scientific names against more than 100 biodiversity databases
      gogolangresolution
      gogolangresolutionbioinformaticsreconciliationverificationbiodiversityscientific-names
      Go
      •
      MIT License
      •2•40•16•0•Updated Jun 6, 2026Jun 6, 2026

    • gnames

      Public
      gnames verifies scientic names with fuzzy matching and speeds of more than 1000 names a second.
      Go
      •
      MIT License
      •0•9•7•0•Updated Jun 4, 2026Jun 4, 2026

    • gnmatcher

      Public
      gnmatcher provides fast stemming, fuzzy matching altorithms for matching scientific names
      Go
      •
      MIT License
      •0•4•0•0•Updated Jun 4, 2026Jun 4, 2026

    • gndoc

      Public
      Go
      •
      MIT License
      •0•1•1•0•Updated May 19, 2026May 19, 2026

    • homebrew-gn

      Public
      Ruby
      •0•0•0•0•Updated May 18, 2026May 18, 2026

    • sfai

      Public
      sfai includes utilities using fine-tuned models
      Go
      •
      MIT License
      •0•0•0•0•Updated May 6, 2026May 6, 2026

    • gnsys

      Public
      Helper package for file system operations
      Go
      •
      MIT License
      •0•0•0•0•Updated Mar 11, 2026Mar 11, 2026

    • gnfmt

      Public
      format is a utility package, it contains format options, conversions to GoB, JSON, CSV
      Go
      •
      MIT License
      •0•1•1•0•Updated Feb 18, 2026Feb 18, 2026

    • gnlib

      Public
      Miscellaneous shared libraries for GNA projects
      Go
      •
      MIT License
      •0•1•0•0•Updated Jan 25, 2026Jan 25, 2026

    • gnapi

      Public
      This project provides OpenAPI documenation for Global Names API services
      Go
      •
      MIT License
      •1•0•0•0•Updated Jan 14, 2026Jan 14, 2026

    • gn

      Public
      It is a utility package for gnames projects
      Go
      •
      MIT License
      •0•0•0•0•Updated Nov 18, 2025Nov 18, 2025

    • bhlnames

      Public
      BHLnames finds nomenclatural events, adds taxonomic intelligence to Biodiversity Heritage Library
      Go
      •
      MIT License
      •0•4•4•0•Updated Oct 28, 2025Oct 28, 2025

    • gnquery

      Public
      Parser for a faceted search queries used for finding scientific names that correspond to given parameters.
      Go
      •
      MIT License
      •0•2•0•0•Updated Sep 30, 2025Sep 30, 2025

    • gnidump

      Public
      Migrates MySQL data of previous version of GNI to PostgreSQL
      Go
      •
      MIT License
      •0•0•1•0•Updated Aug 30, 2025Aug 30, 2025

    • bayes

      Public
      A simple implementation of Naive Bayesian classifier
      Go
      •
      MIT License
      •0•0•0•1•Updated Apr 17, 2025Apr 17, 2025

    • dwca

      Public
      The DwCA library processes Darwin Core Archive files
      Go
      •
      MIT License
      •0•0•4•0•Updated Mar 13, 2025Mar 13, 2025

    • coldp

      Public
      Allows to process CoLDP files
      Go
      •0•0•0•0•Updated Mar 11, 2025Mar 11, 2025

    • gnuuid

      Public
      Go
      •
      MIT License
      •0•0•0•0•Updated Mar 4, 2025Mar 4, 2025

    • bhlindex

      Public
      BHLindex is used by Biodiversity Heritage Library to create their scientific names index
      Go
      •
      MIT License
      •1•10•7•0•Updated Feb 9, 2025Feb 9, 2025

    • gndict

      Public
      gndict creates a scientific names dictionaries to be used in GNfinder
      Go
      •
      MIT License
      •0•0•0•0•Updated Feb 6, 2025Feb 6, 2025

    • ds-ruhoff-mollusca

      Public
      Data-Source out of publication "Index to the species of Mollusca introduced from 1850 to 1870" Ruhoff, Florence A. 1980
      Ruby
      •0•0•0•0•Updated Dec 2, 2024Dec 2, 2024

    • gner

      Public
      Global Named Entity Recognition
      Go
      •
      MIT License
      •0•0•0•0•Updated Dec 2, 2024Dec 2, 2024

    • bhlquest

      Public
      BHLquest: a tool to ask questions about species using Biodiversity Heritage Library Corpus
      Go
      •
      MIT License
      •0•2•0•0•Updated Dec 2, 2024Dec 2, 2024

    • pygnparser

      Public
      A Python wrapper for GNparser
      Python
      •
      MIT License
      •0•0•1•0•Updated Nov 12, 2024Nov 12, 2024

    • aho_corasick

      Public
      Implementation of Aho-Corasick algorithm
      Go
      •
      MIT License
      •0•0•0•0•Updated Nov 11, 2024Nov 11, 2024

    • bhlquest-chat

      Public
      Vue
      •0•0•0•0•Updated May 15, 2024May 15, 2024
    ProTip! When viewing an organization's repositories, you can use the props. filter to filter by custom property.