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    8 repositories

    • metagenomic_PT-seq_data_analysis

      Public
      scripts for whole genome and metagenomic PT-seq data analysis
      Shell
      •
      MIT License
      •0•0•0•0•Updated Mar 15, 2026Mar 15, 2026

    • AvaS_tRNA_mod

      Public
      Scripts used in the manuscript "Pyridoxal phosphate-dependent biosynthesis of aminovaleramide by AvaS in tRNA"
      mass-spectrometrytrnaepitranscriptome
      mass-spectrometrytrnaepitranscriptome
      Python
      •
      MIT License
      •0•0•0•0•Updated Mar 3, 2026Mar 3, 2026

    • PTseq_data_analysis

      Public
      Pipeline for PT-seq data analysis
      Shell
      •
      MIT License
      •0•0•0•0•Updated Dec 11, 2025Dec 11, 2025

    • AQRNA-seq-method-optimization

      Public
      Shell
      •0•0•0•0•Updated Jul 26, 2025Jul 26, 2025

    • ASCS

      Public
      A statistical approach of analysis of synonymous codon signatures (ASCS) that maps codon-biased onto a functional network of gene categories.
      R
      •1•0•0•0•Updated Jun 9, 2025Jun 9, 2025

    • AQRNA-seq-JoVE

      Public
      Instructions and scripts for running the data analytics pipeline of AQRNA-seq
      Shell
      •0•0•0•0•Updated Dec 3, 2023Dec 3, 2023

    • general_aqrnaseq

      Public
      a general AQRNAseq pipeline that can process both eukaryote and prokaryote samples
      0•1•0•0•Updated Nov 10, 2021Nov 10, 2021

    • aqrnaseq

      Public
      Processing scripts for AQ RNA-seq
      Python
      •0•0•0•0•Updated Oct 28, 2019Oct 28, 2019
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