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@cellmapslab Computational Cell Maps

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    10 repositories

    • NetIso

      Public
      Integrative Gene and Isoform Co-expression Networks Reveal Regulatory Rewiring in Stress-related Psychiatric Disorders
      Jupyter Notebook
      •1•0•0•0•Updated Jun 2, 2025Jun 2, 2025

    • ImmuneDepressionSymptoms

      Public
      R
      •0•1•0•0•Updated Jul 18, 2024Jul 18, 2024

    • longmixr

      Public
      R
      •
      GNU General Public License v2.0
      •1•4•0•0•Updated Feb 6, 2024Feb 6, 2024

    • dex-stim-human-dna-methyl-qc

      Public
      Dexamethasone-stimulated DNAm QC
      R
      •0•0•0•0•Updated Mar 1, 2023Mar 1, 2023

    • embed_multimodalNet

      Public
      R
      •1•1•0•0•Updated Feb 28, 2023Feb 28, 2023

    • kimono

      Public
      KiMONo is a network inference tool for multi-omics datasets. The multi-omics network is calculated by sparse-group-LASSO regression and can incorporate prior bi…
      network-inferencedata-integrationmulti-omic
      network-inferencedata-integrationmulti-omic
      R
      •4•10•0•0•Updated Nov 21, 2022Nov 21, 2022

    • auger

      Public
      R
      •0•0•0•0•Updated Jun 24, 2020Jun 24, 2020

    • DeepWAS

      Public
      DeepWAS: Directly integrating regulatory information into GWAS using machine learning
      Jupyter Notebook
      •5•18•1•0•Updated Mar 14, 2019Mar 14, 2019

    • misina

      Public
      Misina: Finding microRNA-mediated effects of genetic variants with an integrative approach
      R
      •0•2•0•0•Updated Jun 25, 2018Jun 25, 2018

    • test_review

      Public archive
      1•0•0•0•Updated Mar 29, 2018Mar 29, 2018
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