None identical gene between eset and reference had been found. Check your eset using: intersect(rownames(eset), rownames(reference))

[LeaLe88]

Dear all,

I get above error as it was described in issue #124.

I was mentioned there that the CIBERSORT version, which is the same as mine, had a bug and was modified.

But it seems that the error is still existing.

Best Regards,
Lea

[LeaLe88]

Good afternoon,

Anyone can help me with this?

Thank you!

[LorenzoMerotto]

Hello,
we are unfortunately we aware of this issue, which has been described also in #137 .
You can use thiis Cibersort script
https://github.com/cansysbio/HGSOC_TME_Heterogeneity/blob/b697b8a6113d31196715f6ef581648237f8e9414/Scripts/3/CIBERSORT.R