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fix(deps): update all non-major dependencies - #6

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This PR body was truncated due to platform limits.

This PR contains the following updates:

Package Type Update Change OpenSSF Age Adoption Passing Confidence
DavidAnson/markdownlint-cli2 repository minor v0.23.3 → v0.24.0 OpenSSF Scorecard age adoption passing confidence
actions/create-github-app-token action minor v3.2.0 → v3.3.0 OpenSSF Scorecard age adoption passing confidence
astral-sh/ruff-pre-commit repository patch v0.17.1 → v0.17.3 OpenSSF Scorecard age adoption passing confidence
astral-sh/setup-uv action minor v10.2.0 → v10.3.3 OpenSSF Scorecard age adoption passing confidence
astral-sh/uv-pre-commit repository patch 0.13.1 → 0.13.6 OpenSSF Scorecard age adoption passing confidence
graphifyy project.dependencies patch ==0.9.92 → ==0.9.97 OpenSSF Scorecard age adoption passing confidence
langchain_core (changelog) project.dependencies minor ==1.6.6 → ==1.7.3 OpenSSF Scorecard age adoption passing confidence
langchain_openai (changelog) project.dependencies minor ==1.6.6 → ==1.7.3 OpenSSF Scorecard age adoption passing confidence
langgraph (source, changelog) project.dependencies patch ==1.2.12 → ==1.2.18 OpenSSF Scorecard age adoption passing confidence
langgraph-checkpoint-sqlite (source) project.dependencies patch ==3.1.1 → ==3.1.2 OpenSSF Scorecard age adoption passing confidence
langsmith project.dependencies patch ==0.14.1 → ==0.14.16 OpenSSF Scorecard age adoption passing confidence
networkx project.dependencies minor ==3.6.1 → ==3.7 OpenSSF Scorecard age adoption passing confidence
numpy project.dependencies patch ==2.5.3 → ==2.5.4 age adoption passing confidence
openai project.dependencies minor ==3.22.1 → ==3.41.0 OpenSSF Scorecard age adoption passing confidence
playwright (changelog) project.dependencies minor ==1.62.0 → ==1.64.1 OpenSSF Scorecard age adoption passing confidence
pydantic (changelog) project.dependencies minor ==2.13.5 → ==2.14.2 OpenSSF Scorecard age adoption passing confidence
pytest (changelog) dependency-groups minor ==9.1.1 → ==9.2.0 OpenSSF Scorecard age adoption passing confidence
python-dotenv project.dependencies patch ==1.2.3 → ==1.2.4 OpenSSF Scorecard age adoption passing confidence
renovatebot/pre-commit-hooks repository minor 44.168.2 → 44.198.0 OpenSSF Scorecard age adoption passing confidence
tavily_python project.dependencies minor ==0.7.27 → ==0.8.5 OpenSSF Scorecard age adoption passing confidence
tree_sitter project.dependencies minor ==0.25.2 → ==0.26.0 OpenSSF Scorecard age adoption passing confidence
tree_sitter_php project.dependencies minor ==0.24.1 → ==0.25.1 OpenSSF Scorecard age adoption passing confidence

Note: The pre-commit manager in Renovate is not supported by the pre-commit maintainers or community. Please do not report any problems there, instead create a Discussion in the Renovate repository if you have any questions.


Release Notes

DavidAnson/markdownlint-cli2

v0.24.0

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actions/create-github-app-token

v3.3.0

Compare Source

Features
Bug Fixes
  • deps: bump nested undici from 6.24.0 to 6.29.0 (#​403) (12461a3)
  • deps: bump the production-dependencies group across 1 directory with 3 updates (#​395) (a69c19d)
astral-sh/ruff-pre-commit

v0.17.3

Compare Source

See: https://github.com/astral-sh/ruff/releases/tag/0.17.3

v0.17.2

Compare Source

See: https://github.com/astral-sh/ruff/releases/tag/0.17.2

astral-sh/setup-uv

v10.3.3: 🌈 Use Astral mirror for version manifests with GitHub fallback

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Changes

This release contains something that should have been included a very long time ago. Sorry for sleeping on that.

This action now retrieves the release manifest that contains the available versions, their download links and checksums from the Astral mirror, rather than trying GitHub first. This should present much more stable.
(Known checksums are still checked, so the security impact does not change)

Also a big thank you to @​soujasK for a set of bugfixes 👏

🐛 Bug fixes

🧰 Maintenance

📚 Documentation

v10.3.2: 🌈 update known checksums for 0.13.5

Compare Source

Changes
🧰 Maintenance
📚 Documentation

v10.3.1: 🌈 preserve cache error class names in save-cache bundle

Compare Source

Changes

This release includes a fix so that multiple concurrent workflows trying to upload the same cache no longer warn

##[warning]Failed to save: Unable to reserve cache with key ..., another job may be creating this cache.

🐛 Bug fixes
🧰 Maintenance
📚 Documentation
⬆️ Dependency updates

v10.3.0: 🌈 Add Python architecture selection

Compare Source

Changes

This release adds the python-arch input to select a Python architecture independently of the Python version. With uv 0.13.0 or later, set python-arch: x86_64 to use x64 Python on Windows ARM64 runners.

It also includes embedded checksums for uv releases through 0.13.0.

🚀 Enhancements

🧰 Maintenance

⬆️ Dependency updates

astral-sh/uv-pre-commit

v0.13.6

Compare Source

See: https://github.com/astral-sh/uv/releases/tag/0.13.6

v0.13.5

Compare Source

See: https://github.com/astral-sh/uv/releases/tag/0.13.5

v0.13.4

Compare Source

See: https://github.com/astral-sh/uv/releases/tag/0.13.4

v0.13.3

Compare Source

See: https://github.com/astral-sh/uv/releases/tag/0.13.3

v0.13.2

Compare Source

See: https://github.com/astral-sh/uv/releases/tag/0.13.2

Graphify-Labs/graphify (graphifyy)

v0.9.97

Compare Source

  • Security: rationale redaction credential redaction for rationale labels moves to a single pre-cache choke point (_redact_rationale_labels inside _safe_extract), so no extractor can skip it, and it now covers more leak shapes: URL userinfo with an empty user or with //@ in the password, PEM private-key bodies, tokens glued to surrounding text by _ (for example ghp_...), Slack xoxe- refresh tokens, short JWTs, and Common Lisp docstrings that previously built labels without redacting. Benign strings (hashes, sk- prose, URLs without userinfo) are left alone (#​4647, thanks @​0xkaushik-ai).
  • Security: deps anyio is floored to >=4.14.2 in the mcp extra, above CVE-2026-63374 (an IDNA 2003 vs 2008 hostname-validation bypass that let a MITM on a non-ASCII domain present a cert for a different ASCII host, CVSS 9.3). anyio is only a transitive dependency and the lockfile already resolves 4.15.1, so this is a floor to stop a future re-resolution from regressing.
  • Fix: markdown ATX headings parse per CommonMark: a trailing run of # is not part of the heading text (## Setup ## is "Setup"), up to three spaces of indent are allowed (four is an indented code block), and a hash-only line like ## ## mints no node (#​4790, #​4791, thanks @​jaimemartinez).
  • Fix: markdown fenced code blocks are tracked by CommonMark rules (backtick and tilde fences, info strings, matching close length), so a line that looks like a heading inside a fence no longer leaks as structure, and a heading after a ~~~ block that contains a ``` line is no longer lost (#​4787, #​4788, thanks @​jaimemartinez).
  • Fix: yaml structural extraction reads the composed node tree, so keys carry their written spelling and their own source line instead of all landing on line 1, and YAML 1.1 bare keys like on/off/yes/no are no longer folded to booleans (a workflow on: block is extracted, not turned into a True node) (#​4784, #​4785, thanks @​jaimemartinez).
  • Fix: razor a component's @implements interfaces are extracted as implements edges instead of being silently dropped (#​4820, thanks @​ayushcodes10).
  • Fix: terraform an aliased provider block gets its own alias-qualified node (so two provider "aws" blocks no longer collapse into one and lose attributes), and a provider = aws.west reference resolves to it instead of dangling; a local literally named provider is no longer misread (#​4819, thanks @​ayushcodes10).
  • Fix: cobol paragraphs that follow a nested END PROGRAM reattach to the enclosing program instead of sticking to the nested one, via a program stack (#​4824, thanks @​ayushcodes10).
  • Fix: blade a wire:click directive binds the bare method name: dotted modifiers (wire:click.prevent="submit") are matched, call arguments are trimmed from the name (deleteItem(5) binds deleteItem), and a $-prefixed magic action mints no fabricated edge (#​4823, thanks @​ayushcodes10).
  • Fix: pascal a record is recognised as a type with its own methods in the regex fallback (the default path without the optional pascal extra), matching the tree-sitter path; operator members are extracted too (#​4825, thanks @​ayushcodes10).
  • Fix: vbnet an Operator declaration is extracted as an operator-kind member of its class and its body is walked for calls, so a helper call inside an operator no longer vanishes (#​4821, thanks @​ayushcodes10).
  • Fix: fortran a call resolves to the subroutine it actually names instead of a target salted with the calling file's name (which never resolved), using the extractor's own cross-file stub idiom (#​4795, thanks @​ayushcodes10).
  • Fix: cli graphify query --help/-h (and now graphify explain --help/-h) with nothing else prints usage instead of running a literal query for the text "--help"; a longer question that merely contains "--help" as a substring still runs as a query (#​4830, thanks @​curl-man).
  • Fix: js a nested (inner) function no longer leaks into the file-wide name map, so a call elsewhere in the file binds to the top-level function of that name rather than an inner one it cannot see; recursion, shadowing and sibling scopes resolve correctly (ports the Python scope scheme to JS/TS) (#​4767, thanks @​smngvlkz).
  • Fix: ocaml every binding in an and-chained module ... and ... or class ... and ... is extracted, not just the first, so later bindings are no longer silently dropped; each carries its own source line (#​4822, thanks @​ayushcodes10).
  • Fix: verilog a SystemVerilog class task method is modeled like a function one (its own node, method edge and parameter-type references), and a task-local variable no longer leaks as a false field reference on the class (#​4774, thanks @​ayushcodes10).
  • Fix: build an edge with no relation is dropped instead of persisted, on both the build and the raw --no-cluster write paths, and alias folding (relationship to relation) runs before the check (#​4810, thanks @​legendteddy; reproducer also filed as #​4826 by @​sunhouy).
  • Fix: build the shrink guard counts a saved document-mention node that folds into its AST file twin on reload as present, not lost, so a cluster-only write is no longer refused when nothing was actually lost (#​4778, #​4779, thanks @​AndresDiagoM).
  • Fix: detect a linked git worktree whose main checkout resolves inside the scan root is pruned, so a sibling worktree no longer gets indexed as a second full copy of the repo (#​4683, #​4833, thanks @​barlowa124; duplicate work in #​4685 by @​AndresDiagoM).
  • Fix: resolution an inline comment in a pnpm-workspace glob is stripped per YAML rules, and a glob that Path.glob rejects (a ** component or an absolute pattern) is skipped with a warning instead of crashing the whole extract run (#​4681, #​4687, thanks @​Deepjyoti-Sarmah).
  • Fix: report a community hub [[wikilink]] is slugged through the same export._obsidian_safe_stem the export uses, so the link matches the file the export actually writes instead of dangling (#​4696, thanks @​ayushcodes10).
  • Fix: wiki a community relabelled only by letter case keeps its article instead of having the sweep delete the file the run just wrote; on a case-sensitive filesystem the stale lower-case twin is unlinked rather than renamed over the fresh file (which would silently restore the old body) (#​4508, #​4798, thanks @​dupeisen).
  • Fix: query filler verbs get/gets/got/getting are dropped from query terms (like the existing work/works), so a framework hub labelled "Get" is not pulled in as a BFS seed by an exact-match bonus; node lookups for a literal Get still resolve (#​4686, thanks @​AndresDiagoM).

v0.9.96

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  • Security: deps the Pillow floor is raised to >=13.0.0 on Python 3.11+ (staying at >=12.3.0 on 3.10, which Pillow 13 no longer supports) and pypdf to >=6.19.0, and the lockfile is refreshed to patched versions of transitive dependencies (pyjwt, cryptography, certifi, urllib3, anyio, fsspec, soupsieve, virtualenv). This clears the bulk of the open Dependabot advisories; the Pillow image-parsing CVEs are only patched upstream for Python 3.11+, so a 3.10 install keeps the newest 3.10-compatible Pillow.
  • Fix: llm a chunk that failed before returning a response no longer has its files reported as model omissions; the warning distinguishes a failed chunk from a genuine omission, and both are still re-dispatched (#​3616, #​4752, thanks @​jaimemartinez; reported by @​GREYGROUPJP).
  • Fix: watch a Markdown file that detect() classifies as a paper (arXiv markers, an Abstract) is included in the watch quick-scan rebuild instead of contributing zero nodes; a paper that already has a semantic layer is still excluded from the AST quick-scan (#​4750, #​4751, thanks @​jaimemartinez; reported by @​yeochul-jeon).
  • Fix: prs every unfinished CheckRun status (WAITING, REQUESTED, PENDING, ...) counts as pending CI, so a PR gated on a deployment-protection job is no longer read as ready (#​4730, thanks @​rudycelekli).
  • Fix: export an Obsidian note lists every parallel relation between two nodes (for example both imports and calls) instead of only the first edge (#​4731, thanks @​rudycelekli).
  • Fix: build a hyperedge whose members are given under the members/node_ids aliases has its numeric member ids coerced to strings like the canonical nodes list, so the hyperedge is no longer dropped (#​4732, thanks @​rudycelekli).
  • Fix: llm a code node whose confidence is written in a different case (extracted/Extracted) is still evidence-checked before it folds to the EXTRACTED enum, so an un-verified node is not presented as solid (#​4733, thanks @​rudycelekli).
  • Fix: python a member call binds to the method it actually spells rather than a case/underscore-folded twin (run() no longer resolves to _run()); a lone folded method still resolves, and a genuine collision fails closed (#​4734, thanks @​rudycelekli).
  • Fix: zig a call no longer crosses between a method and a same-named free function; a bare call binds the free function and a receiver call binds the method (#​4755, thanks @​ayushcodes10).
  • Fix: dart an unnamed extension on T { } declaration is detected and extracted (the name is optional), so its members attach to the extended type (#​4741, thanks @​ayushcodes10).
  • Fix: llm the DeepSeek backend sends its output cap as max_tokens (which DeepSeek honours) rather than max_completion_tokens (which it ignores), so responses are no longer silently uncapped (#​4739, #​4753, thanks @​Ethereal49; reported by @​snapp-kenya).
  • Fix: extract XAML codebehind (*.xaml to *.xaml.cs) resolves deterministically regardless of directory iteration order, so a graph built on a case-sensitive filesystem is stable (#​4747, thanks @​anishraja04).
  • Fix: extract the AST cache hit rate is reported over the file total, not the uncached set, so a warm run no longer prints a misleading "100% uncached" line (#​4740, #​4746, thanks @​Deepjyoti-Sarmah; reported by @​lavaxun).
  • Fix: dedup a node id legitimately shared by two files as a module/namespace no longer prints a spurious "minted by two different files" warning (#​4756, thanks @​idachev).
  • Fix: python the member-call resolver binds only Python callers to Python targets, so a same-named class in another language is no longer mis-bound as a call (#​4757, thanks @​idachev).
  • Fix: cli the PreToolUse hook reminders are worded as facts rather than imperatives, so the agent's tool-result stream no longer reads them as prompt injection and ignores them (#​2202, #​4764, thanks @​smngvlkz).
  • Fix: llm the Ollama context window is sized from an estimate that counts non-Latin characters as whole tokens and from the real system-prompt length, so a non-English or long prompt is no longer silently truncated (#​4414, #​4761, thanks @​smngvlkz).
  • Fix: cli graphify extract records each run's token usage to graphify-out/cost.json (the same ledger the skill writes), so a standalone extract refresh updates the cost history (#​1769, #​4765, thanks @​smngvlkz).
  • Fix: ts chained TypeScript decorators (@(Link().toMany())) are recovered as a decorator reference, and a lossy-parse warning names the real error region (#​4711, #​4715, thanks @​Deepjyoti-Sarmah).
  • Fix: js a const X = require('pkg') binding for an external package keeps its node (with the package as source) so new X() still resolves, while a require of a corpus-local file still folds to the required module (#​4688, #​4702, thanks @​ayushcodes10).
  • Fix: detect generated MSBuild obj/ and bin/ output is pruned only when build evidence is present (restore/runtime markers nearby), so a C# project scanned after a build no longer ingests generated sources while a real src/bin stays (#​4742, thanks @​Great-Peace).
  • Fix: watch each watch rebuild is bounded by GRAPHIFY_REBUILD_TIMEOUT (default 600s, 0 disables), with a thread-Timer fallback where SIGALRM is unavailable or watch() runs off the main thread (a SIGALRM arm there raises ValueError and would tear the watcher down before the rebuild ran), so a hung rebuild no longer stalls the watcher (#​2173, #​4724, thanks @​danieldutu).
  • Fix: robot each duplicate test-case name gets its own node (salted by line), so two tests with the same name are kept distinct (#​4697, thanks @​ayushcodes10).
  • Fix: vbnet external namespaces and types emit a sourceless stub carrying an empty source_file sentinel like other languages, instead of a node that fails validation (#​4725, #​4728, thanks @​madanlalit; reported by @​alopezradicle).
  • Fix: rust a use is scoped to the crate it names, so use serde_json::Value no longer resolves to a same-named type in another crate; a named pub use re-export is followed and a manifest-less binding stays INFERRED (#​4699, #​4712, thanks @​Deepjyoti-Sarmah).
  • Fix: python a call through a field injected from a constructor parameter, or through a local typed by a method's return annotation, resolves to the target method (INFERRED); it requires a single unambiguous producer and class (#​4726, thanks @​keny11300).
  • Fix: dedup an LLM-marked cross-document reference stub that collides with its real definition is namespaced instead of silently dropped, so neither node is lost (#​4738, #​4743, thanks @​SinghAman21; reported by @​snapp-kenya).
  • Perf: update a graphify update with no relevant input change skips the detect/extract/build pipeline and leaves the outputs untouched, keyed on the scan file-set, config, .graphifyrc, extractor epoch, and an output-completeness stamp; a scanned file with no manifest row (including one whose extraction previously failed) still forces a full rebuild so a later fix is never skipped (#​4740, #​4748, thanks @​Deepjyoti-Sarmah; reported by @​lavaxun).

v0.9.95

Compare Source

Twenty-one community pull requests. A security pass on install: the skill-install writes go through randomly-named temp files instead of predictable ones, so a pre-planted symlink can no longer redirect a write. Extraction: Python, Go, C++ and Rust explicit type aliases (and Rust union items) are extracted as type nodes so references resolve instead of minting sourceless stubs, each C# method overload gets its own node bound by argument count, and a package.json dependency's manifest entry links to the node that references it. Plus a one-root-per-repo tree on merged graphs, extended-length cache paths on Windows, and binary media no longer counted as text. The AST cache schema is bumped, so the first build after upgrading re-extracts.

  • Fix: security the skill install stages every write (version stamp, SKILL.md, references) through a randomly-named mkstemp/mkdtemp file created with O_EXCL and restrictive mode instead of a predictable *.tmp name, so a local attacker who pre-creates a symlink at that path can no longer redirect the write to clobber an arbitrary file; the final move stays atomic (#​4513, thanks @​Mahdifotohi).
  • Fix: python an explicit module-level type alias (X: TypeAlias = ..., type X = ..., NewType) is extracted as a type node, so a field or parameter typed by the alias resolves to it instead of minting a sourceless stub; an implicit assignment, a local alias, or a re-export is left alone (#​4578, thanks @​madhusudanpatnaik).
  • Fix: go a type A = B alias is extracted as a type node (tree-sitter parses it as a type_alias, not a type_spec), so references resolve to it; a re-export (type Field = pkg.Field) mints no node (#​4579, thanks @​madhusudanpatnaik).
  • Fix: cpp a namespace-scope using A = B; or typedef B A; alias is extracted as a type node so references resolve; a member alias inside a class and a same-name re-export are excluded (#​4580, thanks @​madhusudanpatnaik).
  • Fix: rust a type alias and a union item are extracted as type nodes (a union's fields reference their types like a struct), so references resolve instead of minting stubs; an impl-associated type is excluded (#​4581, Refs #​4285, thanks @​madhusudanpatnaik; reported by @​jonatasbcardio-boop).
  • Fix: csharp each method overload gets its own node and source location instead of collapsing to one, and a call binds to the overload matching its argument count, across in-file, receiver-typed, bare-name cross-file, partial-class, and interface-dispatch resolution; a non-overloaded method keeps its id (#​4584, #​4591, thanks @​Mpasha17; reported by @​TerraVenil).
  • Fix: tree graphify export tree on a merged multi-repo graph gives each repo its own root (keyed by the repo tag) instead of conflating same-path files from different repos; untagged nodes are not counted as a repo (#​4524, #​4525, thanks @​AromalBiju1).
  • Fix: cache AST cache entries are read and written through Windows extended-length (\\?\) paths, so a deep cache path over the 260-character limit no longer fails extraction with a FileNotFoundError; a no-op off Windows (#​4542, thanks @​omsenjalia).
  • Fix: detect a binary media file (an image or audio/video) is no longer read and counted as text toward the corpus word total; an SVG stays counted as the XML text it is (#​4548, thanks @​kalkaran).
  • Fix: json_config a package.json dependency's manifest entry links (declares) to the ref node that importing code resolves to, so the manifest entry and its importers share one node instead of being orphaned; the entry is relabelled name@range (#​4569, #​4572, thanks @​Deepjyoti-Sarmah; reported by @​BiSide).
  • Feature: yaml .yaml/.yml files are now extracted structurally (a file node plus contains edges to keys) and classified as code rather than documents, so Helm

[!IMPORTANT]
✂ PR body was truncated to here.


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@renovate renovate Bot added dependencies Pull requests that update a dependency file no-stale This will not be marked as stale labels Oct 26, 2026
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⚠️ Artifact update problem

Renovate failed to update an artifact related to this branch. You probably do not want to merge this PR as-is.

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The artifact failure details are included below:

File name: uv.lock
Using CPython 3.15.2 interpreter at: /opt/containerbase/tools/python/3.15.2/bin/python3
error: No solution found when resolving dependencies for split (markers: python_full_version >= '3.13')
  cause: Because graphifyy>=0.9.97 depends on tree-sitter-php>=0.23,<0.25 and your project depends on graphifyy==0.9.97, we can conclude that your project depends on tree-sitter-php>=0.23,<0.25.
         And because your project depends on tree-sitter-php==0.25.1, we can conclude that your project's requirements are unsatisfiable.

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renovate Bot force-pushed the renovate/all-minor-patch branch 17 times, most recently from e2c845f to 0831ebf Compare October 29, 2026 22:16
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renovate Bot force-pushed the renovate/all-minor-patch branch from 0831ebf to 14b3568 Compare October 30, 2026 02:01
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