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Welcome to my profile
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Welcome to my profile
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moebouassida/README.md

👋 Hello

Coding Animation

💡 AI/ML Engineer working at the intersection of Medical Imaging, Digital Pathology & Vision-Language Models (VLMs)
🔬 Research internship focused on automating Tumor-Stroma Ratio (TSR) scoring in colorectal pathology using deep learning and digital pathology workflows
🚀 Interested in multimodal models, medical imaging, segmentation, VQA for pathology, and foundation/diffusion models
🎓 Looking for an opportunity in AI for medical imaging and multimodal biomedical data

🛠 Skills & Tools (Core Stack)

🔹 Computer Vision & Medical AI + 🔹 MLOps / Deployment

  • 🧠 PyTorch – Deep learning, computer vision & VLM fine-tuning
  • 🤗 Hugging Face Transformers – CLIP, LLaVA, Med-Gemma & multimodal VQA
  • 🖼 MONAI – Medical image processing, segmentation & pathology workflows
  • ☁️ AWS (Lambda, S3, DynamoDB) – Serverless AI backends & scalable model deployment
  • ⚙️ Docker + FastAPI – Containerized API serving for AI services

📫 Connect with Me

LinkedIn
Email

✨ Thanks for visiting! Feel free to explore my repositories or reach out for collaboration.

Pinned Loading

  1. multiagent-radiology-report multiagent-radiology-report Public

    Production-grade multi-agent AI system for radiology report generation. 4 LangGraph agents (Groq vision + Qdrant RAG + Claude Sonnet report drafting + QA validation) with Grad-CAM XAI heatmaps, man…

    Python 3 2

  2. OmicPath OmicPath Public

    OmicPath — Multimodal breast cancer survival prediction fusing gigapixel H&E slides (UNI2-h + ABMIL) with RNA-seq pathway scores. Jointly predicts 5-year survival risk, PAM50 subtype, and TP53 muta…

    Python 1

  3. Path-VQA-Med-GaMMa-Fine-Tuning Path-VQA-Med-GaMMa-Fine-Tuning Public

    DoRA fine-tuning of Med-GaMMa 4B on PathVQA Enhanced (~32K clinical QA pairs) for pathology visual question answering. +14pp yes/no accuracy over zero-shot baseline. Trained on H100 SXM. Gradio dem…

    Python

  4. SwinUNETR-3D-Brain-Segmentation SwinUNETR-3D-Brain-Segmentation Public

    3D brain tumor segmentation · SwinUNETR v2 · 0.8961 Dice on BraTS 2021 · WebGL viewer with hand gesture control · LangGraph AI agents · AWS Terraform deployment

    Python 5 1

  5. Breast-Cancer-Segmentation Breast-Cancer-Segmentation Public

    Breast tumor segmentation from ultrasound images using a custom U-Net — Dice: 0.73 | IoU: 0.66 | FastAPI · Gradio · Docker · GitHub Actions CI/CD · HuggingFace Spaces demo.

    Python 2

  6. medical-ai-middleware medical-ai-middleware Public

    GDPR compliance, Prometheus monitoring, and rate limiting for medical AI FastAPI services — one import to add audit logging, right to erasure, consent enforcement, and IP anonymization.

    Python