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Disable deploying documentation from PR - #835

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TuomasBorman merged 6 commits into
microbiome:develfrom
sabujcb:devel
Jul 30, 2026
Merged

Disable deploying documentation from PR#835
TuomasBorman merged 6 commits into
microbiome:develfrom
sabujcb:devel

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@sabujcb

@sabujcb sabujcb commented Jul 22, 2026

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work setup update

@sabujcb sabujcb changed the title Add GitHub Actions workflow for R builds filterRPCAInput()` for raw RPCA and JointRPCA inputs Jul 22, 2026
@antagomir

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Hi @sabujcb can you add a short explanation here what this PR does?

@TuomasBorman TuomasBorman changed the title filterRPCAInput()` for raw RPCA and JointRPCA inputs Disable deploying documentation from PR Jul 29, 2026
@TuomasBorman

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The current GHA builds the documentation and then tries to deploy it. This leads to an error because it does not have permission to deploy to gh-pages.

Disabling this also disables building the full documentation. This means that the GHA no longer checks whether the full documentation website can be generated. However, run_rcmdcheck: ${{ true }} is still enabled, which checks the documentation, examples, and vignettes as part of R CMD check.

I think this is an acceptable trade-off, especially as it lets us use the standard rworkflows workflow.

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Thanks!

@TuomasBorman
TuomasBorman merged commit 2ac01c9 into microbiome:devel Jul 30, 2026
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3 participants