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Merged
TuomasBorman merged 1 commit into from
Aug 4, 2026
Merged

Update Dockerfile #876

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2 changes: 1 addition & 1 deletion Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@ FROM bioconductor/bioconductor_docker:${BIOC_VERSION}
COPY . /opt/pkg

# Install book package
RUN Rscript -e 'repos <- BiocManager::repositories() ; remotes::install_local(path = "/opt/pkg/", repos=repos, dependencies=TRUE, build_vignettes=FALSE, upgrade=TRUE) ; sessioninfo::session_info(installed.packages()[,"Package"], include_base = TRUE)'
RUN Rscript -e 'repos <- BiocManager::repositories(); options(repos = repos); devtools::install("/opt/pkg", dependencies = TRUE, build_vignettes = FALSE); sessioninfo::session_info(installed.packages()[,"Package"], include_base = TRUE)'

## Build/install using same approach than BBS
RUN R CMD INSTALL /opt/pkg
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