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LICENSE
LICENSE
 
 
Maciek_Network.m
Maciek_Network.m
 
 
Maciek_Toy_Example_C13.m
Maciek_Toy_Example_C13.m
 
 
Maciek_Toy_unedited.m
Maciek_Toy_unedited.m
 
 
Optimization2.m
Optimization2.m
 
 
README.md
README.md
 
 
S_matrix.mat
S_matrix.mat
 
 
Three_Component_Dynamics_101122_652pm.m
Three_Component_Dynamics_101122_652pm.m
 
 
Toy_Example_2.m
Toy_Example_2.m
 
 
Toy_Model_Maciek_Dynamics_101122_7pm.m
Toy_Model_Maciek_Dynamics_101122_7pm.m
 
 
Toy_Model_Maciek_Dynamics_execute_101122_730pm.m
Toy_Model_Maciek_Dynamics_execute_101122_730pm.m
 
 
get_isotopomer_chars.m
get_isotopomer_chars.m
 
 
get_isotopomer_matrix.m
get_isotopomer_matrix.m
 
 
k.mat
k.mat
 
 
maciek_model.mat
maciek_model.mat
 
 
maciek_rndsim.asv
maciek_rndsim.asv
 
 
maciek_rndsim.m
maciek_rndsim.m
 
 
maciek_rndsim_iso2.asv
maciek_rndsim_iso2.asv
 
 
maciek_rndsim_iso2.m
maciek_rndsim_iso2.m
 
 
metabolite_vec.mat
metabolite_vec.mat
 
 
params.mat
params.mat
 
 
pset3.2.1.xlsx
pset3.2.1.xlsx
 
 
pset3.2.2.1.xlsx
pset3.2.2.1.xlsx
 
 
pset3.2.2.2.xlsx
pset3.2.2.2.xlsx
 
 
pset3.2.2.2extra.xlsx
pset3.2.2.2extra.xlsx
 
 
three_component_101122_627pm.m
three_component_101122_627pm.m
 
 
three_component_execute_101122_630pm.m
three_component_execute_101122_630pm.m
 
 
three_component_simbiology_execute_101122_655pm.m
three_component_simbiology_execute_101122_655pm.m
 
 
toy_model_isotopomer_creation_100622.m
toy_model_isotopomer_creation_100622.m
 
 
toy_model_isotopomer_creation_2.m
toy_model_isotopomer_creation_2.m
 
 
toy_model_isotopomer_execute_100622.m
toy_model_isotopomer_execute_100622.m
 
 
ws_k_vec.mat
ws_k_vec.mat
 
 
xt.mat
xt.mat
 
 
xt2.mat
xt2.mat
 
 
xt2.xlsx
xt2.xlsx
 
 
xt3.mat
xt3.mat
 
 

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E. coli flux balance analysis

Currently in MATLAB. Will be updated to Python.

Most of this code was given to me by Professor Sridharan at Tufts University. I just know how to use it. I am implementing this in Python because MATLAB is very cumbersome to use for a programmer.

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E. coli flux balance analysis

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