V2 Infrastructure#15
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zrm22
approved these changes
Jun 1, 2026
smm477
approved these changes
Jun 1, 2026
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Summary
Adds a version field to the orchestrate YAML config so a single orchestrate command can route to underlying versioned pipelines.
Features
"v1"/"v2") to the orchestrate YAML config. If missing, this will default to"v1".v2pipeline (currently only generates initial gVCFs from AnchorWave)Orchestrate.run()to be a thin wrapper for version dispatch.Bug Fixes
Breaking Changes
Checklist
versioninbuild.gradle.kts(REQUIRED - see below)