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@loosolab

Looso bioinformatics lab

Group of bioinformatics at the Max Planck Institute for Heart and Lung Research

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  1. TOBIAS TOBIAS Public

    Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal

    Python 259 45

  2. scanpro scanpro Public

    A modular tool for proportion analysis in single-cell sequencing data

    Jupyter Notebook 28 4

  3. TF-COMB TF-COMB Public

    Transcription Factor Co-Occurrence using Market Basket analysis

    Python 20 2

  4. UROPA UROPA Public

    Universal RObust Peak Annotator

    Python 19 7

  5. SC-Framework SC-Framework Public

    A framework for single cell analysis

    HTML 13 3

  6. cardiac-progenitors cardiac-progenitors Public

    Single cell RNA-seq and ATAC seq analysis of cardiac progenitor cell transition states and lineage settlement

    R 11 4

Repositories

Showing 10 of 36 repositories
  • MAMPOK Public
    loosolab/MAMPOK's past year of commit activity
    Python 2 MIT 0 0 0 Updated Oct 26, 2026
  • SC-Framework Public

    A framework for single cell analysis

    loosolab/SC-Framework's past year of commit activity
    HTML 13 MIT 3 0 0 Updated Oct 9, 2026
  • loosolab/mampok-gatekeeper-example's past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 7, 2026
  • PEAKQC Public

    PEAK-QC: Periodicity Evaluation in ATAC-seq as Key aspect in Quality Control

    loosolab/PEAKQC's past year of commit activity
    Jupyter Notebook 4 MIT 0 0 0 Updated Sep 14, 2026
  • loosolab/FRED_whitelists's past year of commit activity
    Python 0 MIT 0 0 0 Updated Sep 1, 2026
  • FRED Public
    loosolab/FRED's past year of commit activity
    Python 4 MIT 1 0 0 Updated Aug 24, 2026
  • TOBIAS Public

    Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal

    loosolab/TOBIAS's past year of commit activity
    Python 259 MIT 45 0 0 Updated Aug 3, 2026
  • wilson Public

    WIlsON: Webbased Interactive Omics visualizatioN. This is a mirror of

    loosolab/wilson's past year of commit activity
    R 2 2 0 0 Updated Jul 28, 2026
  • loosolab/FRED_standalone's past year of commit activity
    HTML 0 MIT 0 0 0 Updated Jun 8, 2026
  • Code_Schultheis_et_al_2025_SC-Framework Public

    Contains the analysis results of the SC-Framework manuscript

    loosolab/Code_Schultheis_et_al_2025_SC-Framework's past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated May 4, 2026

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