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| author | Kate Lawrenson, Marcos A. S. Fonseca, Felipe Segato, et. al. | |||||||||||||||||||||||||||
| date | November, 2019 | |||||||||||||||||||||||||||
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knitr::opts_chunk$set(echo = TRUE)
This document contains workflows, explaining how to perform all analysis described in A Study of High-Grade Serous Ovarian Cancer Origins Implicates the SOX18 Transcription Factor in Tumor Development.
https://lawrenson-lab.github.io/OvarianRNASeq/index.html
Marcos A. S. Fonseca & Felipe Segato.
To install the required packages to run the code below please execute the follwing code.
deps <- c("gelnet","dplyr","gdata","DT", "TxDb.Hsapiens.UCSC.hg19.knownGene", "org.Hs.eg.db", "GenomicRanges")
for(pkg in deps) if (!pkg %in% installed.packages()) install.packages(pkg, dependencies = TRUE)