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Releases: labgem/netsyn

v1.0.3: Update __init__.py

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@baudstam baudstam released this 19 Jun 09:23
921db3e

correct version number

v1.0.2

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@baudstam baudstam released this 18 Jun 21:08
e28cac0

Minor changes: correct the Report file and correct typo

v1.0.1

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@JeanMainguy JeanMainguy released this 15 Apr 13:16
4d07de7

Minor Changes

  • HTML report : Pick as default the clustering method that produce the least amount of clusters in #6
  • HTML report : Add a star on target gene in the right panel #7

Full Changelog: v1.0.0...v1.0.1

Release v1.0.0

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@JeanMainguy JeanMainguy released this 25 Apr 16:18
3fd4459

New feature

Compute alpha index to describe synteny clusters. A cluster is considered coherent when most of the nodes in the same cluster are interconnected. The alpha index gives an idea of the connectivity within a specific cluster. A value of 1 indicates a completely connected cluster while a value of 0 means a completely disconnected cluster.

Full Changelog: v0.1.2...v1.0.0

Release v0.1.2

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@JeanMainguy JeanMainguy released this 22 Feb 08:47
d7cf5ff

Bug fixe:

  • A small fix to prevent the igraph error of issue #1. networkx is now used instead of igraph to write the graphML output.

Add instruction in the README to install netsyn with bioconda.

Release 0.1.1

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@baudstam baudstam released this 28 Jul 08:12

New Release 0.1.1

Bug fixes :

  • Modify the queries to Uniprot due to the Uniprot API modification in june 2022
  • cd fix partial network error in community search