CEST Analyzer is the software for B0 correction and generating MTR map of CEST (Chemical Exchange Saturation Transfer) images.
- Support various B0 correction methods: Spline correction, Lorentzian correction, IDE-LF
- CEST mapping: MTR_assymmetry mapping, MTR_Rex mapping, PTR mapping
- SNR mapping
- Export processed images as NiFTI file: Z-spectrum, MTR
- Python3
- Numpy, Scipy
- OpenCV, PIL, scikit-image
- Pydicom, Nibabel
- matplotlib
$ git clone https://github.com/kim01414/CEST_Analyzer
When you downloaded files and installed all requirements, then running:
$ python main.py
CEST Analyzer must need RF frequency offeset file to handle CEST images. (ex) ./CEST_frequency/CEST3_freq_user8_200716.txt
128
96
64
48
32
16
0
-16
-32
-48
-64
-96
-128
