khanlab-snakemake
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hcp_mmp_to_native
hcp_mmp_to_native PublicSnakemake workflow for generating native space hcp-mmp segmentations (requires Freesurfer run)
Python 1
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Repositories
- .github Public
- hcp_mmp_to_native Public
Snakemake workflow for generating native space hcp-mmp segmentations (requires Freesurfer run)
- ants_build_template_camcan Public Forked from akhanf/greedy_template_camcan
template building for cam-can dataset
- ants_build_template_smk Public template Forked from akhanf/ants_build_template_smk
Snakemake workflow for building an ANTS template (from antsMultivariateTemplateConstruction2.sh)
- snakemake-neuroimaging-intro Public Forked from akhanf/snakemake-neuroimaging-intro
Some slides introducing Snakemake for neuroimaging (WIP!)
- prep_retraining_dwi_hippunfold_smk Public Forked from akhanf/prep_retraining_dwi_hippunfold_smk
Snakemake workflow for pre-processing dwi data to re-train using b1000 hcp data
- diffparc-smk Public Forked from akhanf/diffparc-smk
General-purpose Snakemake workflow for diffusion-based subcortical parcellation
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